Evidence map›Paper›PMID 33046654›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2020

Cyclic peptides can engage a single binding pocket through highly divergent modes.

Karishma Patel, Louise J Walport, James L Walshe, Paul D Solomon, Jason K K Low, Daniel H Tran, Kevork S Mouradian, Ana P G Silva, Lorna Wilkinson-White, Alexander Norman and 7 more

Abstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 24 papers.

0numbers the graph read from it
0cells of the map it votes in
24citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

24 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. De novo discovery of a molecular glue-like macrocyclic peptide that induces MCL1 homodimerization.Proceedings of the National Academy of Sciences of the United States of America · 2025
    Article
  7. Article
  8. Review
  9. Article
  10. Article
  11. Review
  12. Targeting theProceedings of the National Academy of Sciences of the United States of America · 2024
    Article
  13. Article
  14. Article
  15. Review
  16. Article
  17. Rapid capture of small peptide binders.Nature reviews. Chemistry · 2023
    Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

17 authors.

Karishma PatelSchool of Life and Environmental Sciences, The University of Sydney, Sydney, NSW 2006, Australia.ORCID 0000-0003-3034-3840
Louise J WalportProtein-Protein Interaction Laboratory, The Francis Crick Institute, London NW1 1AT, United Kingdom; louise.walport@crick.ac.uk hsuga@chem.s.u-tokyo.ac.jp joel.mackay@sydney.edu.au.ORCID 0000-0002-3795-8365
James L WalsheSchool of Life and Environmental Sciences, The University of Sydney, Sydney, NSW 2006, Australia.ORCID 0000-0001-7220-3120
Paul D SolomonSchool of Life and Environmental Sciences, The University of Sydney, Sydney, NSW 2006, Australia.
Jason K K LowSchool of Life and Environmental Sciences, The University of Sydney, Sydney, NSW 2006, Australia.ORCID 0000-0003-0862-0012
Daniel H TranSchool of Chemistry, The University of Sydney, Sydney, NSW 2006, Australia.ORCID 0000-0002-2327-9468
Kevork S MouradianSchool of Life and Environmental Sciences, The University of Sydney, Sydney, NSW 2006, Australia.
Ana P G SilvaSchool of Life and Environmental Sciences, The University of Sydney, Sydney, NSW 2006, Australia.ORCID 0000-0001-7922-264X
Lorna Wilkinson-WhiteSydney Analytical Core Research Facility, The University of Sydney, NSW 2006, Australia.
Alexander NormanSchool of Chemistry, The University of Sydney, Sydney, NSW 2006, Australia.
Charlotte FranckSchool of Life and Environmental Sciences, The University of Sydney, Sydney, NSW 2006, Australia.
Jacqueline M MatthewsSchool of Life and Environmental Sciences, The University of Sydney, Sydney, NSW 2006, Australia.
J Mitchell GussSchool of Life and Environmental Sciences, The University of Sydney, Sydney, NSW 2006, Australia.ORCID 0000-0003-4259-6079
Richard J PayneSchool of Chemistry, The University of Sydney, Sydney, NSW 2006, Australia.ORCID 0000-0002-3618-9226
Toby PassiouraSchool of Life and Environmental Sciences, The University of Sydney, Sydney, NSW 2006, Australia.ORCID 0000-0002-6089-5067
Hiroaki SugaDepartment of Chemistry, Graduate School of Science, The University of Tokyo, Tokyo 113-0033, Japan; louise.walport@crick.ac.uk hsuga@chem.s.u-tokyo.ac.jp joel.mackay@sydney.edu.au.ORCID 0000-0002-5298-9186
Joel P MackaySchool of Life and Environmental Sciences, The University of Sydney, Sydney, NSW 2006, Australia; louise.walport@crick.ac.uk hsuga@chem.s.u-tokyo.ac.jp joel.mackay@sydney.edu.au.ORCID 0000-0001-7508-8033

Funding

Cancer Research UK FC001748Medical Research Council FC001748Wellcome TrustWellcome Trust FC001748
6 · The paper itself

Abstract

Cyclic peptide library screening technologies show immense promise for identifying drug leads and chemical probes for challenging targets. However, the structural and functional diversity encoded within such libraries is largely undefined. We have systematically profiled the affinity, selectivity, and structural features of library-derived cyclic peptides selected to recognize three closely related targets: the acetyllysine-binding bromodomain proteins BRD2, -3, and -4. We report affinities as low as 100 pM and specificities of up to 10

Indexed as

Peptide LibraryPeptides, CyclicBinding SitesBromodomain Containing ProteinsDrug DiscoveryHumansProtein BindingProtein DomainsTranscription FactorsBRD2 protein, humanBRD3 protein, humanBromodomain Containing ProteinsPeptide LibraryPeptides, CyclicTranscription FactorsBET bromodomain inhibitionBRD3BRD4de novo cyclic peptidesstructural biology

Identifiers

PMID33046654
PMCPMC7604503

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.