Evidence map›Paper›PMID 33044973›Full record

ArticlePloS one2020

Multicenter analysis of sputum microbiota in tuberculosis patients.

Claudia Sala, Andrej Benjak, Delia Goletti, Sayera Banu, Jesica Mazza-Stadler, Katia Jaton, Philippe Busso, Sille Remm, Marion Leleu, Jacques Rougemont and 8 more

Abstract readMulticenter Study
In one paragraph

Article in PloS one, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed.

  1. Review
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  4. The Interplay betweenClinics and practice · 2024
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

18 authors.

Claudia SalaFaculty of Life Sciences, Ecole Polytechnique Fédérale de Lausanne, Lausanne, Switzerland.ORCID 0000-0003-4031-4648
Andrej BenjakFaculty of Life Sciences, Ecole Polytechnique Fédérale de Lausanne, Lausanne, Switzerland.
Delia GolettiNational Institute for Infectious Diseases "L. Spallanzani"-IRCCS, Rome, Italy.
Sayera Banuicddr,b, Dhaka, Bangladesh.
Jesica Mazza-StadlerCentre Hospitalier Universitaire Vaudois, Lausanne, Switzerland.
Katia JatonCentre Hospitalier Universitaire Vaudois, Lausanne, Switzerland.
Philippe BussoFaculty of Life Sciences, Ecole Polytechnique Fédérale de Lausanne, Lausanne, Switzerland.
Sille RemmFaculty of Life Sciences, Ecole Polytechnique Fédérale de Lausanne, Lausanne, Switzerland.ORCID 0000-0001-5204-4556
Marion LeleuFaculty of Life Sciences, Ecole Polytechnique Fédérale de Lausanne, Lausanne, Switzerland.
Jacques RougemontFaculty of Life Sciences, Ecole Polytechnique Fédérale de Lausanne, Lausanne, Switzerland.
Fabrizio PalmieriNational Institute for Infectious Diseases "L. Spallanzani"-IRCCS, Rome, Italy.
Gilda CuzziNational Institute for Infectious Diseases "L. Spallanzani"-IRCCS, Rome, Italy.
Ornella ButeraNational Institute for Infectious Diseases "L. Spallanzani"-IRCCS, Rome, Italy.
Valentina VaniniNational Institute for Infectious Diseases "L. Spallanzani"-IRCCS, Rome, Italy.
Senjuti Kabiricddr,b, Dhaka, Bangladesh.ORCID 0000-0002-5625-3918
S M Mazidur Rahmanicddr,b, Dhaka, Bangladesh.ORCID 0000-0003-2887-6250
Laurent NicodCentre Hospitalier Universitaire Vaudois, Lausanne, Switzerland.
Stewart T ColeFaculty of Life Sciences, Ecole Polytechnique Fédérale de Lausanne, Lausanne, Switzerland.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The impact of tuberculosis and of anti-tuberculosis therapy on composition and modification of human lung microbiota has been the object of several investigations. However, no clear outcome has been presented so far and the relationship between M. tuberculosis pulmonary infection and the resident lung microbiota remains vague. In this work we describe the results obtained from a multicenter study of the microbiota of sputum samples from patients with tuberculosis or unrelated lung diseases and healthy donors recruited in Switzerland, Italy and Bangladesh, with the ultimate goal of discovering a microbiota-based biomarker associated with tuberculosis. Bacterial 16S rDNA amplification, high-throughput sequencing and extensive bioinformatic analyses revealed patient-specific flora and high variability in taxon abundance. No common signature could be identified among the individuals enrolled except for minor differences which were not consistent among the different geographical settings. Moreover, anti-tuberculosis therapy did not cause any important variation in microbiota diversity, thus precluding its exploitation as a biomarker for the follow up of tuberculosis patients undergoing treatment.

Indexed as

AdultAgedBangladeshBiomarkersDNA, RibosomalFemaleHigh-Throughput Nucleotide SequencingHumansItalyMaleMiddle AgedRNA, Ribosomal, 16SSputumSwitzerlandTuberculosisYoung AdultBiomarkersDNA, RibosomalRNA, Ribosomal, 16S

Identifiers

PMID33044973
PMCPMC7549818

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.