Evidence map›Paper›PMID 33043389›Full record

ArticleApplied microbiology and biotechnology2020

A novel Rap-Phr system in Bacillus velezensis NAU-B3 regulates surfactin production and sporulation via interaction with ComA.

Zhao Liang, Jun-Qing Qiao, Ping-Ping Li, Lu-Lu Zhang, Zi-Xuan Qiao, Ling Lin, Chen-Jie Yu, Yang Yang, Muhammad Zubair, Qin Gu and 3 more

Abstract read
PubMed Publisher
In one paragraph

Article in Applied microbiology and biotechnology, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers.

0numbers the graph read from it
0cells of the map it votes in
18citing papers in PubMed
1.4field-weighted citation impact, top 18% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

18 citing papers in PubMed, 34 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. Article
  5. Article
  6. Biocontrol Mechanism ofBiomolecules · 2025
    Article
  7. Article
  8. Article
  9. Review
  10. Article
  11. Review
  12. Article
  13. Evaluation of the Biocontrol Efficiency ofPathogens (Basel, Switzerland) · 2023
    Article
  14. Toxicity ofInternational journal of molecular sciences · 2022
    Article
  15. γ-Polyglutamic Acid Production, Biocontrol, and Stress Tolerance: Multifunction ofInternational journal of environmental research and public health · 2022
    Article
  16. The Role of Pyoluteorin fromInternational journal of molecular sciences · 2022
    Article
  17. Frontiers in plant science · 2022
    Article
  18. Beneficial Effects of Spore-FormingFrontiers in veterinary science · 2022
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 4 institutions in 2 countries.

Zhao LiangDepartment of Plant Pathology, College of Plant Protection, Nanjing Agricultural University, Nanjing, 210095, Jiangsu Province, People's Republic of China.
Jun-Qing QiaoInstitute of Plant Protection, Jiangsu Academy of Agricultural Sciences, Nanjing, 210014, Jiangsu Province, People's Republic of China.
Ping-Ping LiDepartment of Plant Pathology, College of Plant Protection, Nanjing Agricultural University, Nanjing, 210095, Jiangsu Province, People's Republic of China.
Lu-Lu ZhangDepartment of Plant Pathology, College of Plant Protection, Nanjing Agricultural University, Nanjing, 210095, Jiangsu Province, People's Republic of China.
Zi-Xuan QiaoDepartment of Plant Pathology, College of Plant Protection, Nanjing Agricultural University, Nanjing, 210095, Jiangsu Province, People's Republic of China.
Ling LinDepartment of Plant Pathology, College of Plant Protection, Nanjing Agricultural University, Nanjing, 210095, Jiangsu Province, People's Republic of China.
Chen-Jie YuDepartment of Plant Pathology, College of Plant Protection, Nanjing Agricultural University, Nanjing, 210095, Jiangsu Province, People's Republic of China.
Yang YangDepartment of Plant Pathology, College of Plant Protection, Nanjing Agricultural University, Nanjing, 210095, Jiangsu Province, People's Republic of China.
Muhammad ZubairDepartment of Plant Pathology, College of Plant Protection, Nanjing Agricultural University, Nanjing, 210095, Jiangsu Province, People's Republic of China.
Qin GuDepartment of Plant Pathology, College of Plant Protection, Nanjing Agricultural University, Nanjing, 210095, Jiangsu Province, People's Republic of China.
Hui-Jun WuDepartment of Plant Pathology, College of Plant Protection, Nanjing Agricultural University, Nanjing, 210095, Jiangsu Province, People's Republic of China. hjwu@njau.edu.cn.
Rainer BorrissNordreet UG Greifswald, Greifswald, Germany.
Xue-Wen GaoDepartment of Plant Pathology, College of Plant Protection, Nanjing Agricultural University, Nanjing, 210095, Jiangsu Province, People's Republic of China.
Nanjing Agricultural University · CNMinistry of Education of the People's Republic of China · CNInstitute of Marine Biotechnology · DEInstitute of Plant Protection · CN

Funding

Basic Research Program of Jiangsu Province BK20181322National Key R&D Program of China 2017YFD0201101National Natural Science Foundation of China 31972325Special Fund for the Fundamental Research Funds for Central Universities KYZ201708
6 · The paper itself

Abstract

Several quorum sensing systems occurring in Bacillus subtilis, e.g. Rap-Phr systems, were reported to interact with major regulatory proteins, such as ComA, DegU, and Spo0A, in order to regulate competence, sporulation, and synthesis of secondary metabolites. In this study, we characterized a novel Rap-Phr system, RapA4-PhrA4, in Bacillus velezensis NAU-B3. We found that the rapA4 and phrA4 genes were co-transcribed in NAU-B3. When rapA4 was expressed in the heterologous host Bacillus subtilis OKB105, surfactin production and sporulation were severely inhibited. However, when the phrA4 was co-expressed, the RapA4 activity was inhibited. The transcription of the surfactin synthetase srfA gene and sporulation-related genes were also regulated by the RapA4-PhrA4 system. In vitro results obtained from electrophoretic mobility shift assay (EMSA) proved that RapA4 inhibits ComA binding to the promoter of the srfA operon, and the PhrA4 pentapeptide acts as anti-activator of RapA4. We also found that the F24 residue plays a key role in RapA4 function. This study indicated that the novel RapA4-PhrA4 system regulates the surfactin synthesis and sporulation via interaction with ComA, thereby supporting the bacterium to compete and to survive in a hostile environment. KEY POINTS: •Bacillus velezensis NAU-B3 has a novel Rap-Phr quorum sensing system, which does not occur in model strains Bacillus subtilis 168 and B. velezensis FZB42. •RapA4-PhrA4 regulates surfactin production and sporulation. •RapA4-PhrA4 interacts with the ComA protein from ComP/ComA two-component system.

Indexed as

Gene Expression Regulation, BacterialSpores, BacterialBacillusBacillus subtilisBacterial ProteinsBacterial ProteinsBacillusQuorum sensing systemRap-Phr systemSporulationSurfactin

Identifiers

PMID33043389
OpenAlexW3092501786

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.