Evidence map›Paper›PMID 33043253›Full record

ReviewPerspectives in ecology and conservation

Assessing the SARS-CoV-2 threat to wildlife: Potential risk to a broad range of mammals.

Fernando Martínez-Hernández, Ana Belem Isaak-Delgado, Jorge Alberto Alfonso-Toledo, Claudia Irais Muñoz-García, Guiehdani Villalobos, Nidia Aréchiga-Ceballos, Emilio Rendón-Franco

Open access · diamondAbstract readReview
In one paragraph

Review in Perspectives in ecology and conservation. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 22 papers.

0numbers the graph read from it
0cells of the map it votes in
22citing papers in PubMed
0.6field-weighted citation impact, top 19% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

22 citing papers in PubMed, 30 citations in OpenAlex.

  1. Review
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  7. SARS-CoV-2 transmission from infected owner to household dogs and cats is associated with food sharing.International journal of infectious diseases : IJID : official publication of the International Society for Infectious Diseases · 2022
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  8. Article
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  11. Article
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  13. Zoonotic spill-over of SARS-CoV-2: mink-adapted virus in humans.Clinical microbiology and infection : the official publication of the European Society of Clinical Microbiology and Infectious Diseases · 2022
    Article
  14. Article
  15. Review
  16. Article
  17. Article
  18. Review
  19. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 4 institutions in 1 country.

Fernando Martínez-HernándezDepartamento de Ecología de Agentes Patógenos, Hospital General "Dr. Manuel Gea González", Calzada de Tlalpan #4800, Tlalpan, 14080 Mexico City, Mexico.
Ana Belem Isaak-DelgadoDepartamento de Parasitología, Facultad de Medicina Veterinaria y Zootecnia, Universidad Nacional Autónoma de México, Av. Universidad #3000, Coyoacán, 04510 Mexico City, Mexico.
Jorge Alberto Alfonso-ToledoUnidad de Posgrado, Facultad de Medicina Veterinaria y Zootecnia, Universidad Nacional Autónoma de México, Av. Universidad #3000, Coyoacán, 04510 Mexico City, Mexico.
Claudia Irais Muñoz-GarcíaDepartamento de Producción Agrícola y Animal, Universidad Autónoma Metropolitana, Calzada del Hueso #1100, Col. Villa Quietud, Coyoacán, 04960 Mexico City, Mexico.
Guiehdani VillalobosDepartamento de Ecología de Agentes Patógenos, Hospital General "Dr. Manuel Gea González", Calzada de Tlalpan #4800, Tlalpan, 14080 Mexico City, Mexico.
Nidia Aréchiga-CeballosLaboratorio de Rabia, Instituto de Diagnóstico y Referencia Epidemiológicos, Francisco de P. Miranda 177, Lomas de Plateros, Álvaro Obregón, 01480 Mexico City, Mexico.
Emilio Rendón-FrancoDepartamento de Producción Agrícola y Animal, Universidad Autónoma Metropolitana, Calzada del Hueso #1100, Col. Villa Quietud, Coyoacán, 04960 Mexico City, Mexico.
Hospital General Dr. Manuel Gea Gonzalez · MXUniversidad Autónoma Metropolitana · MXUniversidad Nacional Autónoma de México · MXSecretaria de Salud · MX

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) can infect animals, however, the whole range of potential hosts is still unknown. This work makes an assessment of wildlife susceptibility to SARS-CoV-2 by analyzing the similarities of Angiotensin Converting Enzyme 2 (ACE2) and Transmembrane Protease, Serine 2 (TMPRSS2)-both recognized as receptors and protease for coronavirus spike protein-and the genetic variation of the viral protein spike in the recognition sites. The sequences from different mammals, birds, reptiles, and amphibians, and the sequence from SARS-CoV-2 S protein were obtained from the GenBank. Comparisons of aligned sequences were made by selecting amino acids residues of ACE2, TMPRSS2 and S protein; phylogenetic trees were reconstructed using the same sequences. The species susceptibility was ranked by substituting the values of amino acid residues for both proteins. Our results ranked primates at the top, but surprisingly, just below are carnivores, cetaceans and wild rodents, showing a relatively high potential risk, as opposed to lab rodents that are typically mammals at lower risk. Most of the sequences from birds, reptiles and amphibians occupied the lowest ranges in the analyses. Models and phylogenetic trees outputs showed the species that are more prone to getting infected with SARS-CoV-2. Interestingly, during this short pandemic period, a high haplotypic variation was observed in the RBD of the viral S protein, suggesting new risks for other hosts. Our findings are consistent with other published results reporting laboratory and natural infections in different species. Finally, urgent measures of wildlife monitoring are needed regarding SARS-CoV-2, as well as measures for avoiding or limiting human contact with wildlife, and precautionary measures to protect wildlife workers and researchers; monitoring disposal of waste and sewage than can potentially affect the environment, and designing protocols for dealing with the outbreak.

Indexed as

CarnivoresCetaceanCOVID-19RodentSARS-CoV-2Wildlife

Identifiers

PMID33043253
PMCPMC7534737
OpenAlexW3090168989

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.