Evidence map›Paper›PMID 33042080›Full record

ArticleFrontiers in microbiology2020

Fungal Community, Metabolic Diversity, and Glomalin-Related Soil Proteins (GRSP) Content in Soil Contaminated With Crude Oil After Long-Term Natural Bioremediation.

Anna Gałązka, Jarosław Grządziel, Rafał Gałązka, Karolina Gawryjołek, Aleksandra Ukalska-Jaruga, Bozena Smreczak

Abstract read
In one paragraph

Article in Frontiers in microbiology, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed.

  1. Article
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  5. Cutting edge tools in the field of soil microbiology.Current research in microbial sciences · 2024
    Review
  6. Review
  7. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Anna GałązkaDepartment of Agriculture Microbiology, Institute of Soil Science and Plant Cultivation - State Research Institute, Puławy, Poland.
Jarosław GrządzielDepartment of Agriculture Microbiology, Institute of Soil Science and Plant Cultivation - State Research Institute, Puławy, Poland.
Rafał GałązkaDepartment of Soil Science Erosion and Land Protection, Institute of Soil Science and Plant Cultivation - State Research Institute, Puławy, Poland.
Karolina GawryjołekDepartment of Agriculture Microbiology, Institute of Soil Science and Plant Cultivation - State Research Institute, Puławy, Poland.
Aleksandra Ukalska-JarugaDepartment of Soil Science Erosion and Land Protection, Institute of Soil Science and Plant Cultivation - State Research Institute, Puławy, Poland.
Bozena SmreczakDepartment of Soil Science Erosion and Land Protection, Institute of Soil Science and Plant Cultivation - State Research Institute, Puławy, Poland.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Fungi have increased tolerance to environmental stress (also related to the access of pollutants, e.g., trace elements and polycyclic aromatic hydrocarbons PAHs). The aim of the study was to evaluate the mycobiome and functional diversity of fungi in long-term crude-oil contaminated soils as the potential bioremediators of oil contaminated sites. Samples were taken from three historical oil wells (over a century old) at two distances: within a 0.5 m radius of the oil wells (OWP1, OWP2, and OWP3) and within a 3 m radius from the oil wells as the controls (OW1, OW2, and OW3). Next generation sequencing (for the ITS region) was accompanied with determination of the functional fungal community based on Biolog FFPlates, glomalin related soil protein (GRSP) content, trace element and PAHs concentration. The research hypothesis assumed that long-term natural bioremediation of crude oil contaminated soils can contribute to intensive development of a unique fungal community adapted to the contamination conditions. The identification of such fungi can be of particular importance in soil bioremediation. There were significant differences in the fungal community and functional diversity between the soil samples. The soils collected directly from the oil wells were characterized by higher biological activity and higher diversity of PAH-degrading fungal candidates compared to the soils collected within 3 m of the oil wells. The total glomalin-related soil proteins (T-GRSP) and easily-extractable glomalin-related soil proteins (EE-GRSP) contents were lower in soil samples taken directly from the crude oil well. The control soil (OW) subjected to a long-term natural remediation may already have sufficient conditions for the growth and development of mycorrhizal fungi. The mycobiome of the soils collected directly from the oil wells (OWP1, OWP2, and OWP3) was characterized by a 35% share of PAH-degrading candidates, compared to the soil collected at the 3 m distance from the oil wells (OW1, OW2, and OW3) at < 5%. The main PAH-degrading fungal candidates belong to genera

Indexed as

Biolog FFPlatesfungal communitygenetic diversityglomalin-related soil proteinsITS gene regionmetabolic profilesNGS

Identifiers

PMID33042080
PMCPMC7528562

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.