Evidence map›Paper›PMID 33039896›Full record

ReviewCellular immunology2020

Genomic, proteomic, and systems biology approaches in biomarker discovery for multiple sclerosis.

Carol Chase Huizar, Itay Raphael, Thomas G Forsthuber

Open access · greenAbstract readReview
In one paragraph

Review in Cellular immunology, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
1.9field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 26 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Review
  5. Review
  6. MoNET: an R package for multi-omic network analysis.Bioinformatics (Oxford, England) · 2022
    Article
  7. Article
  8. Article
  9. Review
  10. Article
  11. Review
  12. Digital Twins for Multiple Sclerosis.Frontiers in immunology · 2021
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 2 institutions in 1 country.

Carol Chase HuizarDepartment of Biology, University of Texas at San Antonio, San Antonio, TX, USA.
Itay RaphaelDepartment of Neurological Surgery, University of Pittsburgh, UPMC Children's Hospital, Pittsburgh, PA, USA. Electronic address: i.raphael@pitt.edu.
Thomas G ForsthuberDepartment of Biology, University of Texas at San Antonio, San Antonio, TX, USA. Electronic address: thomas.forsthuber@utsa.edu.
The University of Texas Health Science Center at San Antonio · USUniversity of Pittsburgh · US

Funding

UTSA RISE Research Training ProgramR25GM060655 · NIGMS · UNIVERSITY OF TEXAS SAN ANTONIO · PI BAREA-RODRIGUEZ, EDWIN J · 2000 to 2022
$21.6M
Eliminating autoantibody-producing plasma cells in neuroinflammation via ERK inhibitionR21AI144731 · NIAID · UNIVERSITY OF TEXAS SAN ANTONIO · PI FORSTHUBER, THOMAS G. · 2019 to 2020
$411k
Predictive biomarkers for EAE developmentR21NS084201 · NINDS · UNIVERSITY OF TEXAS SAN ANTONIO · PI FORSTHUBER, THOMAS G. · 2014 to 2015
$404k
NIAID NIH HHS R21 AI144731NIGMS NIH HHS R25 GM060655NINDS NIH HHS R21 NS084201
6 · The paper itself

Abstract

Multiple sclerosis (MS) is a neuroinflammatory disorder characterized by autoimmune-mediated inflammatory lesions in CNS leading to myelin damage and axonal loss. MS is a heterogenous disease with variable and unpredictable disease course. Due to its complex nature, MS is difficult to diagnose and responses to specific treatments may vary between individuals. Therefore, there is an indisputable need for biomarkers for early diagnosis, prediction of disease exacerbations, monitoring the progression of disease, and for measuring responses to therapy. Genomic and proteomic studies have sought to understand the molecular basis of MS and find biomarker candidates. Advances in next-generation sequencing and mass-spectrometry techniques have yielded an unprecedented amount of genomic and proteomic data; yet, translation of the results into the clinic has been underwhelming. This has prompted the development of novel data science techniques for exploring these large datasets to identify biologically relevant relationships and ultimately point towards useful biomarkers. Herein we discuss optimization of omics study designs, advances in the generation of omics data, and systems biology approaches aimed at improving biomarker discovery and translation to the clinic for MS.

Indexed as

BiomarkersGenomicsHumansMultiple SclerosisProteomicsSystems BiologyBiomarkersBiomarkersGenomicMultiple sclerosisNetworksProteomicSystems biology

Identifiers

PMID33039896
PMCPMC7927152
OpenAlexW3087804487

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.