Evidence map›Paper›PMID 33039724›Full record

ArticleEuropean journal of medicinal chemistry2021

Extension of furopyrimidine nucleosides with 5-alkynyl substituent: Synthesis, high fluorescence, and antiviral effect in the absence of free ribose hydroxyl groups.

Renata Kaczmarek, Dylan J Twardy, Trevor L Olson, Dariusz Korczyński, Graciela Andrei, Robert Snoeck, Rafał Dolot, Kraig A Wheeler, Roman Dembinski

Open access · greenAbstract read
In one paragraph

Article in European journal of medicinal chemistry, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
0.1field-weighted citation impact, top 41% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 11 citations in OpenAlex.

  1. Article
  2. Synthesis of benzo[Beilstein journal of organic chemistry · 2024
    Article
  3. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 4 institutions in 3 countries.

Renata KaczmarekCentre of Molecular and Macromolecular Studies, Polish Academy of Sciences, Sienkiewicza 112, 90-363, Łódź, Poland.
Dylan J TwardyDepartment of Chemistry, Oakland University, 146 Library Drive, Rochester, MI, 48309-4479, USA.
Trevor L OlsonDepartment of Chemistry, Oakland University, 146 Library Drive, Rochester, MI, 48309-4479, USA.
Dariusz KorczyńskiCentre of Molecular and Macromolecular Studies, Polish Academy of Sciences, Sienkiewicza 112, 90-363, Łódź, Poland.
Graciela AndreiRega Institute, Department of Microbiology, Immunology and Transplantation, Herestraat 49, 3000, Leuven, Belgium.
Robert SnoeckRega Institute, Department of Microbiology, Immunology and Transplantation, Herestraat 49, 3000, Leuven, Belgium.
Rafał DolotCentre of Molecular and Macromolecular Studies, Polish Academy of Sciences, Sienkiewicza 112, 90-363, Łódź, Poland.
Kraig A WheelerDepartment of Chemistry, Whitworth University, 300 W. Hawthorne Rd., Spokane, WA, 99251, USA.
Roman DembinskiCentre of Molecular and Macromolecular Studies, Polish Academy of Sciences, Sienkiewicza 112, 90-363, Łódź, Poland; Department of Chemistry, Oakland University, 146 Library Drive, Rochester, MI, 48309-4479, USA. Electronic address: dembinsk@oakland.edu.
Centrum Badań Molekularnych i Makromolekularnych Polskiej Akademii Nauk · PLOakland University · USRega Institute for Medical Research · BEWhitworth University · US

Funding

COBALT COMPLEXES OF MODIFIED NUCLEOSIDES, DINUCLEOSIDESR15CA111329 · NCI · OAKLAND UNIVERSITY · PI DEMBINSKI, ROMAN · 2005 to 2005
$217k
NCI NIH HHS R15 CA111329
6 · The paper itself

Abstract

A novel methodology to access alkynyl nucleoside analogues is elaborated. Highly fluorescent 5-alkynylfuropyrimidines were synthesized (97-46%) and their antiviral properties investigated in vitro. Regiochemistry of the functionalization was achieved with the aid of 5-endo-dig electrophilic halocyclization of acetyl 5-p-tolyl- or 5-p-pentylphenyl-2'-deoxyuridine. Structure of one of the resulting nucleosides, 6-p-tolyl-5-iodo-2'-deoxyribofuranosyl-furo[2,3-d]pyrimidin-2-one, was confirmed by X-ray crystallography, and its conformation was compared to related nucleosides. Diverse alkynyl substituents were introduced at the heterobicyclic base C-5 position via Sonogashira coupling of 5-iodo-2'-deoxyribofuranosyl-furo[2,3-d]pyrimidin-2-ones. The resulting compounds had fluorescence emissions of 452-481 nm. High quantum yields of 0.53-0.60 were observed for 9-ethynyl-9-fluorenol and propargyl alcohol/methyl ether-modified furopyrimidines. These modified nucleosides, designed in the form of ribose acetyl esters, are potential tools for fluorescent tagging, studying nucleoside metabolism, 2'-deoxyribonucleoside kinase activity, and antiviral activity. Antiviral assays against a broad spectrum of DNA and RNA viruses showed that in human embryonic lung (HEL) cell cultures some of the compounds posess antiviral activity (EC

Indexed as

Antiviral AgentsCell LineFluorescenceHalogenationHerpesvirus 3, HumanHumansModels, MolecularPyrimidine NucleosidesVaricella Zoster Virus InfectionAntiviral AgentsPyrimidine NucleosidesAlkynesAntiviral chemotherapyFuropyrimidinesModified nucleosidesVaricella-zoster virus (VZV)

Identifiers

PMID33039724
PMCPMC7521880
OpenAlexW3087846077

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.