Evidence map›Paper›PMID 33038983›Full record

ReviewBest practice & research. Clinical haematology2020

Spliceosomal factor mutations and mis-splicing in MDS.

Courtney E Hershberger, Noah J Daniels, Richard A Padgett

Open access · greenAbstract readReview
In one paragraph

Review in Best practice & research. Clinical haematology, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
0.3field-weighted citation impact, top 43% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 8 citations in OpenAlex.

  1. Review
  2. Article
  3. Review
  4. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 2 institutions in 1 country.

Courtney E HershbergerDepartment of Molecular Medicine, Cleveland Clinic College of Medicine of Case Western Reserve University, Cleveland, OH, USA. Electronic address: hershbc@ccf.org.
Noah J DanielsDepartment of Molecular Medicine, Cleveland Clinic College of Medicine of Case Western Reserve University, Cleveland, OH, USA. Electronic address: danieln3@ccf.org.
Richard A PadgettDepartment of Molecular Medicine, Cleveland Clinic College of Medicine of Case Western Reserve University, Cleveland, OH, USA. Electronic address: padgetr@ccf.org.
Cleveland Clinic · USCase Western Reserve University · US

Funding

Novel Spliceosomal Defects in Myelodysplastic SyndromesR01HL132071 · NHLBI · CLEVELAND CLINIC LERNER COM-CWRU · PI MACIEJEWSKI, JAROSLAW P., PADGETT, RICHARD A · 2016 to 2019
$2.4M
The effects of LUC7L2 on alternative splicing in myelodysplastic syndromesF31HL131140 · NHLBI · CLEVELAND CLINIC LERNER COM-CWRU · PI HERSHBERGER, COURTNEY ELIZABETH · 2016 to 2018
$106k
NHLBI NIH HHS F31 HL131140NHLBI NIH HHS R01 HL132071
6 · The paper itself

Abstract

Somatic, heterozygous missense and nonsense mutations in at least seven proteins that function in the spliceosome are found at high frequency in MDS patients. These proteins act at various steps in the process of splicing by the spliceosome and lead to characteristic alterations in the alternative splicing of a subset of genes. Several studies have investigated the effects of these mutations and have attempted to identify a commonly affected gene or pathway. Here, we summarize what is known about the normal function of these proteins and how the mutations alter the splicing landscape of the genome. We also summarize the commonly mis-spliced gene targets and discuss the state of mechanistic unification that has been achieved. Finally, we discuss alternative mechanisms by which these mutations may lead to disease.

Indexed as

MutationRNA Splicing FactorsSpliceosomesHumansMyelodysplastic SyndromesRNA SplicingRNA Splicing FactorsAlternative splicingMyelodysplastic syndromeRNA splicingSpliceosome

Identifiers

PMID33038983
PMCPMC8078562
OpenAlexW3046700982

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.