Evidence map›Paper›PMID 33037254›Full record

ArticleScientific reports2020

Analysis of microRNA-34a expression profile and rs2666433 variant in colorectal cancer: a pilot study.

Manal S Fawzy, Afaf T Ibrahiem, Baraah T Abu AlSel, Saleh A Alghamdi, Eman A Toraih

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
1.0field-weighted citation impact, top 29% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 18 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. Review
  5. Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. Antioxidants-Related Superoxide Dismutase (Antioxidants (Basel, Switzerland) · 2021
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 3 institutions in 3 countries.

Manal S FawzyDepartment of Biochemistry, Faculty of Medicine, Northern Border University, Arar, 1321, Saudi Arabia. manal_mohamed@med.suez.edu.eg.ORCID http://orcid.org/0000-0003-1252-8403
Afaf T IbrahiemDepartment of Pathology, Faculty of Medicine, Northern Border University, Arar, 1321, Saudi Arabia.
Baraah T Abu AlSelDepartment of Microbiology, Faculty of Medicine, Northern Border University, Arar, 1321, Saudi Arabia.
Saleh A AlghamdiMedical Genetics, Clinical Laboratory Department, College of Applied Medical Sciences, Taif University, Taif, 21944,, Saudi Arabia.
Eman A ToraihDepartment of Surgery, School of Medicine, Tulane University, New Orleans, LA, 70112, USA.
Northern Border University · SASuez Canal University · EGTaif University · SA

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

MicroRNAs (miRNAs) are implicated in every stage of carcinogenesis and play an essential role as genetic biomarkers of cancer. We aimed to evaluate microRNA-34a gene (MIR34A) expression in colorectal cancer (CRC) tissues compared with non-cancer one and to preliminarily explore the association of one related variant to CRC risk. A total of 116 paraffin-embedded colon specimens were enrolled. MiR-34a was quantified by qPCR, and rs2666433 (A/G) genotyping was performed by TaqMan Real-Time PCR. Also, the somatic mutation burden was assessed. MIR34A expression in the CRC specimens was significantly upregulated (median = 21.50, IQR: 7.0-209.2; P = 0.001) relative to the non-cancer tissues. Allele (A) was highly prevalent in CRC tissues represented 0.56 (P < 0.001). AA/AG genotype carriers were 5.7 and 2.8 more likely to develop cancer than GG carriers. Tumor-normal tissue paired analysis revealed genotype concordance in 33 out of 58 tissue samples. Approximately 43% of the specimens showed a tendency for G to A shift. Additionally, a higher frequency of somatic mutation (92%) was observed in adenocarcinoma (P = 0.006). MIR34A expression and gene variant did not show associations with the clinicopathological data. However, G > A somatic mutation carriers had more prolonged DFS and OS. Bioinformatics analysis revealed miR-34a could target 30 genes that are implied in all steps of CRC tumorigenesis. In conclusion, this study confirms MIR34A upregulation in CRC tissues, and its rs2666433 (A/G) variant showed association with CRC and a high somatic mutation rate in cancer tissues. MiR-34a could provide a novel targeted therapy after validation in large-scale studies.

Indexed as

Biomarkers, TumorCarcinogenesisColorectal NeoplasmsFemaleGene Expression Regulation, NeoplasticGenotypeHumansMaleMicroRNAsMutationPilot ProjectsUp-RegulationBiomarkers, TumorMicroRNAsMIRN34 microRNA, human

Identifiers

PMID33037254
PMCPMC7547073
OpenAlexW3091998038

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.