Evidence map›Paper›PMID 33037199›Full record

ArticleNature communications2020

Resonance energy transfer sensitises and monitors in situ switching of LOV2-based optogenetic actuators.

Li-Li Li, Florence M Klein, Lorenzo Li Greci, Arkadiusz Popinigis, Florian Freudenberg, Michael J Courtney

Abstract readVideo-Audio Media
In one paragraph

Article in Nature communications, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Li-Li LiNeuronal Signalling Lab, Turku Bioscience Centre, University of Turku and Åbo Academy University, Biocity, Turku, Finland.ORCID http://orcid.org/0000-0002-8888-153X
Florence M KleinNeuronal Signalling Lab, Turku Bioscience Centre, University of Turku and Åbo Academy University, Biocity, Turku, Finland.
Lorenzo Li GreciNeuronal Signalling Lab, Turku Bioscience Centre, University of Turku and Åbo Academy University, Biocity, Turku, Finland.ORCID http://orcid.org/0000-0002-1909-7645
Arkadiusz PopinigisNeuronal Signalling Lab, Turku Bioscience Centre, University of Turku and Åbo Academy University, Biocity, Turku, Finland.
Florian FreudenbergDepartment of Psychiatry, Psychosomatic Medicine and Psychotherapy, University Hospital, Goethe University, Frankfurt, Germany.ORCID http://orcid.org/0000-0003-1438-3850
Michael J CourtneyNeuronal Signalling Lab, Turku Bioscience Centre, University of Turku and Åbo Academy University, Biocity, Turku, Finland. michael.courtney@bioscience.fi.ORCID http://orcid.org/0000-0001-8693-3933

Funding

NOS1AP as a novel target for treating pathological painR01CA200417 · NCI · TRUSTEES OF INDIANA UNIVERSITY · PI COURTNEY, MICHAEL, HOHMANN, ANDREA GRACE · 2016 to 2020
$1.4M
NCI NIH HHS R01 CA200417
6 · The paper itself

Abstract

Engineered light-dependent switches provide uniquely powerful opportunities to investigate and control cell regulatory mechanisms. Existing tools offer high spatiotemporal resolution, reversibility and repeatability. Cellular optogenetics applications remain limited with diffusible targets as the response of the actuator is difficult to independently validate. Blue light levels commonly needed for actuation can be cytotoxic, precluding long-term experiments. We describe a simple approach overcoming these obstacles. Resonance energy transfer can be used to constitutively or dynamically modulate actuation sensitivity. This simultaneously offers on-line monitoring of light-dependent switching and precise quantification of activation-relaxation properties in intact living cells. Applying this approach to different LOV2-based switches reveals that flanking sequences can lead to relaxation times up to 11-fold faster than anticipated. In situ-measured parameter values guide the design of target-inhibiting actuation trains with minimal blue-light exposure, and context-based optimisation can increase sensitivity and experimental throughput a further 10-fold without loss of temporal precision.

Indexed as

AnimalsEnergy TransferFemaleFluorescence Resonance Energy TransferGreen Fluorescent ProteinsHEK293 CellsHippocampusHumansLightMaleMAP Kinase Signaling SystemMolecular ImagingNeuronsOptogeneticsPhototropinsRatsGreen Fluorescent ProteinsPhototropinsRecombinant Fusion Proteins

Identifiers

PMID33037199
PMCPMC7547724

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.