Evidence map›Paper›PMID 33037050›Full record

ArticleGenetics2020

Tissue-Specific Transcription Footprinting Using RNA PoI DamID (RAPID) in

Georgina Gómez-Saldivar, Jaime Osuna-Luque, Jennifer I Semple, Dominique A Glauser, Sophie Jarriault, Peter Meister

Open access · hybridAbstract read
In one paragraph

Article in Genetics, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
2.1field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 26 citations in OpenAlex.

  1. Article
  2. Review
  3. Review
  4. Article
  5. Single-tissue proteomics inProceedings of the National Academy of Sciences of the United States of America · 2024
    Article
  6. Article
  7. Review
  8. Article
  9. Article
  10. Hand Dissection of Caenorhabditis elegans Intestines.Journal of visualized experiments : JoVE · 2022
    Article
  11. Targeted DamID inScience advances · 2022
    Article
  12. Article
  13. Article
  14. WidespreadmicroPublication biology · 2021
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 4 institutions in 2 countries.

Georgina Gómez-Saldivar *Department of Biology, University of Fribourg, Fribourg 1700, Switzerland.ORCID 0000-0003-3264-3222
Jaime Osuna-Luque *Cell Fate and Nuclear Organization, Institute of Cell Biology, University of Bern, 3012, Switzerland.ORCID 0000-0001-5701-4129
Jennifer I SempleCell Fate and Nuclear Organization, Institute of Cell Biology, University of Bern, 3012, Switzerland.ORCID 0000-0001-7221-9560
Dominique A GlauserDepartment of Biology, University of Fribourg, Fribourg 1700, Switzerland dominique.glauser@unifr.ch sophie@igbmc.fr peter.meister@izb.unibe.ch.ORCID 0000-0002-3228-7304
Sophie JarriaultIGBMC, DBSC Dept/INSERM U1258/CNRS UMR7104/Université de Strasbourg, 67400 France dominique.glauser@unifr.ch sophie@igbmc.fr peter.meister@izb.unibe.ch.ORCID 0000-0003-2847-1675
Peter MeisterCell Fate and Nuclear Organization, Institute of Cell Biology, University of Bern, 3012, Switzerland dominique.glauser@unifr.ch sophie@igbmc.fr peter.meister@izb.unibe.ch.ORCID 0000-0002-6230-4216
University of Bern · CHUniversity of Fribourg · CHCentre National de la Recherche Scientifique · FRInstitut de génétique et de biologie moléculaire et cellulaire · FR

Funding

Enhancing and expanding the CGC Strain CollectionP40OD010440 · OD · UNIVERSITY OF MINNESOTA · PI Ann E. Rougvie · 2012 to 2026
$7.5M
NIH HHS P40 OD010440
6 · The paper itself

Abstract

Differential gene expression across cell types underlies development and cell physiology in multicellular organisms.

Indexed as

AnimalsBlastomeresCaenorhabditis elegansCaenorhabditis elegans ProteinsDNA-Directed RNA PolymerasesGene Expression ProfilingNeuroendocrine CellsOrgan SpecificityProtein FootprintingRecombinant ProteinsRNA-SeqSite-Specific DNA-Methyltransferase (Adenine-Specific)Caenorhabditis elegans ProteinsDam methyltransferaseDNA-Directed RNA PolymerasesRecombinant ProteinsSite-Specific DNA-Methyltransferase (Adenine-Specific)C. elegans targeted DamIDONT long read sequencingRNA polymerase footprintingsingle cell type gene expression analysis

Identifiers

PMID33037050
PMCPMC7768263
OpenAlexW3092483357

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.