Evidence map›Paper›PMID 33037041›Full record

ReviewJournal of cell science2020

Molecular basis for KDEL-mediated retrieval of escaped ER-resident proteins - SWEET talking the COPs.

Simon Newstead, Francis Barr

Open access · hybridAbstract readReview
In one paragraph

Review in Journal of cell science, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 34 papers.

0numbers the graph read from it
0cells of the map it votes in
34citing papers in PubMed
4.4field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

34 citing papers in PubMed, 68 citations in OpenAlex.

  1. Article
  2. Review
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  15. Future opportunities in solute carrier structural biology.Nature structural & molecular biology · 2024
    Review
  16. Article
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  19. Activation of CaMolecular and cellular biochemistry · 2024
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 1 institution in 1 country.

Simon NewsteadDepartment of Biochemistry, University of Oxford, South Parks Rd, Oxford OX1 3QU, UK simon.newstead@bioch.ox.ac.uk francis.barr@bioch.ox.ac.uk.ORCID 0000-0001-7432-2270
Francis BarrDepartment of Biochemistry, University of Oxford, South Parks Rd, Oxford OX1 3QU, UK simon.newstead@bioch.ox.ac.uk francis.barr@bioch.ox.ac.uk.ORCID 0000-0001-7518-253X
University of Oxford · GB

Funding

Wellcome TrustWellcome Trust 215519/Z/19/ZWellcome Trust 219531/Z/19/Z
6 · The paper itself

Abstract

Protein localisation in the cell is controlled through the function of trafficking receptors, which recognise specific signal sequences and direct cargo proteins to different locations. The KDEL receptor (KDELR) was one of the first intracellular trafficking receptors identified and plays an essential role in maintaining the integrity of the early secretory pathway. The receptor recognises variants of a canonical C-terminal Lys-Asp-Glu-Leu (KDEL) signal sequence on ER-resident proteins when these escape to the Golgi, and targets these proteins to COPI- coated vesicles for retrograde transport back to the ER. The empty receptor is then recycled from the ER back to the Golgi by COPII-coated vesicles. Crystal structures of the KDELR show that it is structurally related to the PQ-loop family of transporters that are found in both pro- and eukaryotes, and shuttle sugars, amino acids and vitamins across cellular membranes. Furthermore, analogous to PQ-loop transporters, the KDELR undergoes a pH-dependent and ligand-regulated conformational cycle. Here, we propose that the striking structural similarity between the KDELR and PQ-loop transporters reveals a connection between transport and trafficking in the cell, with important implications for understanding trafficking receptor evolution and function.

Indexed as

Endoplasmic ReticulumGolgi ApparatusCOP-Coated VesiclesProteinsProtein TransportProteinsMembrane transportStructural BiologyTrafficking receptors

Identifiers

PMID33037041
PMCPMC7561476
OpenAlexW3092599765

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.