Evidence map›Paper›PMID 33033251›Full record

ArticleNature communications2020

Intermolecular channels direct crystal orientation in mineralized collagen.

YiFei Xu, Fabio Nudelman, E Deniz Eren, Maarten J M Wirix, Bram Cantaert, Wouter H Nijhuis, Daniel Hermida-Merino, Giuseppe Portale, Paul H H Bomans, Christian Ottmann and 6 more

Open access · goldAbstract read
In one paragraph

Article in Nature communications, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 49 papers.

0numbers the graph read from it
0cells of the map it votes in
49citing papers in PubMed
6.8field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

49 citing papers in PubMed, 159 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Cross-linking of collagen fibrils leads to preferential gap zone mineralization in vitro.Proceedings of the National Academy of Sciences of the United States of America · 2026
    Article
  5. Control Strategies in Guanine Biocrystallization.Angewandte Chemie (International ed. in English) · 2026
    Review
  6. Role of Metabolic Acids in Shaping Bone-like Apatite Architectures.Chemistry of materials : a publication of the American Chemical Society · 2026
    Article
  7. Article
  8. Review
  9. Review
  10. Review
  11. Article
  12. Poly(ADP-ribose) binding sites on collagen I fibrils for nucleating intrafibrillar bone mineral.Proceedings of the National Academy of Sciences of the United States of America · 2025
    Article
  13. Article
  14. Collagen-Based Scaffolds for Meniscal Repair and Regeneration.Journal of tissue engineering and regenerative medicine · 2025
    Review
  15. Article
  16. Article
  17. Article
  18. Real-time single-molecule observation of incipient collagen fibrillogenesis and remodeling.Proceedings of the National Academy of Sciences of the United States of America · 2024
    Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

16 authors at 8 institutions in 3 countries.

YiFei XuDepartment of Chemical Engineering and Chemistry, Laboratory of Materials and Interface Chemistry and Center for Multiscale Electron Microscopy, Eindhoven University of Technology, PO Box 513, 5600 MB, Eindhoven, The Netherlands.ORCID http://orcid.org/0000-0001-5180-8892
Fabio NudelmanDepartment of Chemical Engineering and Chemistry, Laboratory of Materials and Interface Chemistry and Center for Multiscale Electron Microscopy, Eindhoven University of Technology, PO Box 513, 5600 MB, Eindhoven, The Netherlands.ORCID http://orcid.org/0000-0001-7464-4309
E Deniz ErenInstitute for Complex Molecular Systems, Eindhoven University of Technology, PO Box 513, 5600 MB, Eindhoven, The Netherlands.
Maarten J M WirixDepartment of Chemical Engineering and Chemistry, Laboratory of Materials and Interface Chemistry and Center for Multiscale Electron Microscopy, Eindhoven University of Technology, PO Box 513, 5600 MB, Eindhoven, The Netherlands.
Bram CantaertSchool of Chemistry, University of Leeds, Woodhouse Lane, Leeds, LS2 9JT, UK.
Wouter H NijhuisDepartment of Orthopaedic Surgery, University Medical Centre Utrecht, Wilhelmina Children's Hospital, Utrecht, The Netherlands.
Daniel Hermida-MerinoNetherlands Organization for Scientific Research (NWO), DUBBLE@ESRF, BP220, F38043, Grenoble, France.
Giuseppe PortaleNetherlands Organization for Scientific Research (NWO), DUBBLE@ESRF, BP220, F38043, Grenoble, France.ORCID http://orcid.org/0000-0002-4903-3159
Paul H H BomansDepartment of Chemical Engineering and Chemistry, Laboratory of Materials and Interface Chemistry and Center for Multiscale Electron Microscopy, Eindhoven University of Technology, PO Box 513, 5600 MB, Eindhoven, The Netherlands.
Christian OttmannInstitute for Complex Molecular Systems, Eindhoven University of Technology, PO Box 513, 5600 MB, Eindhoven, The Netherlands.
Heiner FriedrichInstitute for Complex Molecular Systems, Eindhoven University of Technology, PO Box 513, 5600 MB, Eindhoven, The Netherlands.ORCID http://orcid.org/0000-0003-4582-0064
Wim BrasNetherlands Organization for Scientific Research (NWO), DUBBLE@ESRF, BP220, F38043, Grenoble, France.ORCID http://orcid.org/0000-0001-5070-4039
Anat AkivaDepartment of Chemical Engineering and Chemistry, Laboratory of Materials and Interface Chemistry and Center for Multiscale Electron Microscopy, Eindhoven University of Technology, PO Box 513, 5600 MB, Eindhoven, The Netherlands.ORCID http://orcid.org/0000-0003-0414-889X
Joseph P R O OrgelDepartments of Biology, Physics and Biomedical Engineering, Pritzker Institute of Biomedical Science and Engineering, Illinois Institute of Technology, Chicago, IL, 60616, USA. orgel@iit.edu.
Fiona C MeldrumSchool of Chemistry, University of Leeds, Woodhouse Lane, Leeds, LS2 9JT, UK. f.meldrum@leeds.ac.uk.ORCID http://orcid.org/0000-0001-9243-8517
Nico SommerdijkDepartment of Chemical Engineering and Chemistry, Laboratory of Materials and Interface Chemistry and Center for Multiscale Electron Microscopy, Eindhoven University of Technology, PO Box 513, 5600 MB, Eindhoven, The Netherlands. nico.sommerdijk@radboudumc.nl.ORCID http://orcid.org/0000-0002-8956-195X
Eindhoven University of Technology · NLUniversity of Leeds · GBRadboud University Nijmegen · NLDutch Research Council · NLIIT Research Institute · USOak Ridge National Laboratory · USUniversity of Groningen · NLWilhelmina Children's Hospital · NL

Funding

Time resolved SAXS studies on the RP2/Arl3 complex pp.484-485P41GM103622 · NIGMS · ILLINOIS INSTITUTE OF TECHNOLOGY · PI IRVING, THOMAS C · 2012 to 2020
$11.9M
NIGMS NIH HHS P41 GM103622
6 · The paper itself

Abstract

The mineralized collagen fibril is the basic building block of bone, and is commonly pictured as a parallel array of ultrathin carbonated hydroxyapatite (HAp) platelets distributed throughout the collagen. This orientation is often attributed to an epitaxial relationship between the HAp and collagen molecules inside 2D voids within the fibril. Although recent studies have questioned this model, the structural relationship between the collagen matrix and HAp, and the mechanisms by which collagen directs mineralization remain unclear. Here, we use XRD to reveal that the voids in the collagen are in fact cylindrical pores with diameters of ~2 nm, while electron microscopy shows that the HAp crystals in bone are only uniaxially oriented with respect to the collagen. From in vitro mineralization studies with HAp, CaCO

Indexed as

Orientation, SpatialBone and BonesChildCollagenCrystallizationDurapatiteElectronsFemaleHumansMineralsModels, MolecularTomographyX-Ray DiffractionCollagenDurapatiteMinerals

Identifiers

PMID33033251
PMCPMC7545172
OpenAlexW3091986402

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.