Evidence map›Paper›PMID 33033057›Full record

ArticleGenome research2020

Large tandem duplications affect gene expression, 3D organization, and plant-pathogen response.

Ariadna Picart-Picolo, Stefan Grob, Nathalie Picault, Michal Franek, Christel Llauro, Thierry Halter, Tom R Maier, Edouard Jobet, Julie Descombin, Panpan Zhang and 6 more

Open access · bronzeAbstract read
In one paragraph

Article in Genome research, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 32 papers.

0numbers the graph read from it
0cells of the map it votes in
32citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

32 citing papers in PubMed, 50 citations in OpenAlex.

  1. Article
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  6. Review
  7. Article
  8. Article
  9. Article
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  13. Review
  14. Article
  15. 45S rDNA DiversityPlants (Basel, Switzerland) · 2023
    Article
  16. Article
  17. Article
  18. Genome of striped eel catfish (Zoological research · 2023
    Article
  19. Frontiers in plant science · 2023
    Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

16 authors at 5 institutions in 4 countries.

Ariadna Picart-PicoloCNRS, LGDP UMR5096, Université de Perpignan, 66860 Perpignan, France.ORCID 0000-0001-6380-7969
Stefan GrobInstitute of Plant and Microbial Biology, University of Zurich, CH-8008 Zurich, Switzerland.ORCID 0000-0001-6199-7383
Nathalie PicaultCNRS, LGDP UMR5096, Université de Perpignan, 66860 Perpignan, France.ORCID 0000-0003-2770-9688
Michal FranekMendel Centre for Plant Genomics and Proteomics, CEITEC, Masaryk University, 625 00 Brno, Czech Republic.ORCID 0000-0002-9627-1301
Christel LlauroCNRS, LGDP UMR5096, Université de Perpignan, 66860 Perpignan, France.
Thierry HalterENS, IBENS, CNRS/INSERM, PSL Research University, 75005 Paris, France.ORCID 0000-0002-4050-5981
Tom R MaierDepartment of Plant Pathology and Microbiology, Iowa State University, Ames, Iowa 50011, USA.
Edouard JobetCNRS, LGDP UMR5096, Université de Perpignan, 66860 Perpignan, France.ORCID 0000-0003-3000-6537
Julie DescombinCNRS, LGDP UMR5096, Université de Perpignan, 66860 Perpignan, France.
Panpan ZhangUPVD, LGDP UMR5096, Université de Perpignan, 66860 Perpignan, France.
Vijayapalani ParamasivanDepartment of Plant Pathology and Microbiology, Iowa State University, Ames, Iowa 50011, USA.
Thomas J BaumDepartment of Plant Pathology and Microbiology, Iowa State University, Ames, Iowa 50011, USA.ORCID 0000-0001-9241-3141
Lionel NavarroENS, IBENS, CNRS/INSERM, PSL Research University, 75005 Paris, France.ORCID 0000-0003-1083-9478
Martina DvořáčkováMendel Centre for Plant Genomics and Proteomics, CEITEC, Masaryk University, 625 00 Brno, Czech Republic.ORCID 0000-0001-5998-6159
Marie MirouzeUPVD, LGDP UMR5096, Université de Perpignan, 66860 Perpignan, France.ORCID 0000-0002-0514-1270
Frédéric PontvianneCNRS, LGDP UMR5096, Université de Perpignan, 66860 Perpignan, France.ORCID 0000-0002-2913-4104
Centre National de la Recherche Scientifique · FRIowa State University · USCentral European Institute of Technology · CZUniversité de Perpignan · FRUniversity of Zurich · CH

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Rapid plant genome evolution is crucial to adapt to environmental changes. Chromosomal rearrangements and gene copy number variation (CNV) are two important tools for genome evolution and sources for the creation of new genes. However, their emergence takes many generations. In this study, we show that in

Indexed as

Gene DuplicationGene Expression Regulation, PlantGenes, rRNAArabidopsisDisease ResistanceGene ExpressionGenes, PlantGenome, PlantGenomic Instability

Identifiers

PMID33033057
PMCPMC7605254
OpenAlexW3092457372

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.