Evidence map›Paper›PMID 33032255›Full record

ReviewCurrent opinion in chemical biology2020

Rewiring yeast metabolism to synthesize products beyond ethanol.

Francesca V Gambacorta, Joshua J Dietrich, Qiang Yan, Brian F Pfleger

Erratum issuedOpen access · greenAbstract readReview
In one paragraph

Review in Current opinion in chemical biology, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 20 papers.

0numbers the graph read from it
0cells of the map it votes in
20citing papers in PubMed
2.2field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

20 citing papers in PubMed, 58 citations in OpenAlex.

  1. Review
  2. Synthetic and systems biotechnology · 2026
    Article
  3. Review
  4. Article
  5. Review
  6. Article
  7. Review
  8. Endogenous ethanol production in health and disease.Nature reviews. Gastroenterology & hepatology · 2024
    Review
  9. Article
  10. Article
  11. Gaining access to acetyl-CoA by peroxisomal surface display.Synthetic and systems biotechnology · 2023
    Article
  12. Metabolic Engineering ofJournal of fungi (Basel, Switzerland) · 2023
    Article
  13. Article
  14. Article
  15. Review
  16. Article
  17. Article
  18. Article
  19. Combinatorial library design for improving isobutanol production inFrontiers in bioengineering and biotechnology · 2022
    Article
  20. Review
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Francesca V GambacortaDepartment of Chemical and Biological Engineering, University of Wisconsin-Madison, Madison, WI, USA; DOE Great Lakes Bioenergy Research Center, Univ. of Wisconsin-Madison, USA.
Joshua J DietrichDepartment of Chemical and Biological Engineering, University of Wisconsin-Madison, Madison, WI, USA; DOE Great Lakes Bioenergy Research Center, Univ. of Wisconsin-Madison, USA.
Qiang YanDepartment of Chemical and Biological Engineering, University of Wisconsin-Madison, Madison, WI, USA; DOE Center for Advanced Bioenergy and Bioproducts Innovation, Univ. of Wisconsin-Madison, USA.
Brian F PflegerDepartment of Chemical and Biological Engineering, University of Wisconsin-Madison, Madison, WI, USA; DOE Great Lakes Bioenergy Research Center, Univ. of Wisconsin-Madison, USA; DOE Center for Advanced Bioenergy and Bioproducts Innovation, Univ. of Wisconsin-Madison, USA; Microbiology Doctoral Training Program, University of Wisconsin-Madison, Madison, WI, USA. Electronic address: brian.pfleger@wisc.edu.
University of Wisconsin–Madison · US

Funding

BIOTECHNOLOGY TRAINING PROGRAMT32GM008349 · NIGMS · UNIVERSITY OF WISCONSIN-MADISON · PI FOX, BRIAN G · 1989 to 2019
$22.5M
Biotechnology Training ProgramT32GM135066 · NIGMS · UNIVERSITY OF WISCONSIN-MADISON · PI SCOTT M. COYLE, BRIAN G FOX · 2020 to 2026
$7.0M
NIGMS NIH HHS T32 GM008349NIGMS NIH HHS T32 GM135066
6 · The paper itself

Abstract

Saccharomyces cerevisiae, Baker's yeast, is the industrial workhorse for producing ethanol and the subject of substantial metabolic engineering research in both industry and academia. S. cerevisiae has been used to demonstrate production of a wide range of chemical products from glucose. However, in many cases, the demonstrations report titers and yields that fall below thresholds for industrial feasibility. Ethanol synthesis is a central part of S. cerevisiae metabolism, and redirecting flux to other products remains a barrier to industrialize strains for producing other molecules. Removing ethanol producing pathways leads to poor fitness, such as impaired growth on glucose. Here, we review metabolic engineering efforts aimed at restoring growth in non-ethanol producing strains with emphasis on relieving glucose repression associated with the Crabtree effect and rewiring metabolism to provide access to critical cellular building blocks. Substantial progress has been made in the past decade, but many opportunities for improvement remain.

Indexed as

Acetyl Coenzyme AEthanolGlucoseIndustrial MicrobiologyMetabolic EngineeringSaccharomyces cerevisiaeSaccharomyces cerevisiae ProteinsAcetyl Coenzyme AEthanolGlucoseSaccharomyces cerevisiae ProteinsAcetyl-CoAAdaptive laboratory evolutionCrabtree–Warburg effectEthanolGlucoseMetabolic engineeringPyruvate decarboxylase deficientSaccharomyces cerevisiaeYeast

Identifiers

PMID33032255
PMCPMC7736362
OpenAlexW3092079751

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.