Evidence map›Paper›PMID 33031537›Full record

ArticleMolecular biology and evolution2021

Concerning P450 Evolution: Structural Analyses Support Bacterial Origin of Sterol 14α-Demethylases.

David C Lamb, Tatiana Y Hargrove, Bin Zhao, Zdzislaw Wawrzak, Jared V Goldstone, William David Nes, Steven L Kelly, Michael R Waterman, John J Stegeman, Galina I Lepesheva

Open access · hybridAbstract readComparative Study
In one paragraph

Article in Molecular biology and evolution, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 21 papers.

0numbers the graph read from it
0cells of the map it votes in
21citing papers in PubMed
4.1field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

21 citing papers in PubMed, 37 citations in OpenAlex.

  1. Article
  2. Complex Roles of Insect Cytochrome P450s in Chemical Adaptation.International journal of biological sciences · 2026
    Review
  3. A plant-specific cytochromeScience advances · 2025
    Article
  4. Article
  5. Review
  6. Article
  7. Article
  8. Identification of Potent and Selective Inhibitors ofJournal of medicinal chemistry · 2024
    Article
  9. Review
  10. Article
  11. Article
  12. Article
  13. Article
  14. Evolution of Cytochrome P450 Enzymes and Their Redox Partners in Archaea.International journal of molecular sciences · 2023
    Article
  15. Article
  16. Article
  17. Lifestyles Shape the Cytochrome P450 Repertoire of the Bacterial PhylumInternational journal of molecular sciences · 2022
    Article
  18. Structural insights into 3Fe-4S ferredoxins diversity inFrontiers in molecular biosciences · 2022
    Article
  19. Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 5 institutions in 2 countries.

David C LambInstitute of Life Science, Swansea University Medical School, Swansea, United Kingdom.
Tatiana Y HargroveDepartment of Biochemistry, Vanderbilt University School of Medicine, Nashville, TN.
Bin ZhaoDepartment of Biochemistry, Vanderbilt University School of Medicine, Nashville, TN.
Zdzislaw WawrzakSynchrotron Research Center, Life Science Collaborative Access Team, Northwestern University, Argonne, IL.
Jared V GoldstoneBiology Department, Woods Hole Oceanographic Institution, Woods Hole, MA.
William David NesDepartment of Chemistry and Biochemistry, Texas Tech University, Lubbock, TX.
Steven L KellyInstitute of Life Science, Swansea University Medical School, Swansea, United Kingdom.
Michael R WatermanDepartment of Biochemistry, Vanderbilt University School of Medicine, Nashville, TN.
John J StegemanBiology Department, Woods Hole Oceanographic Institution, Woods Hole, MA.
Galina I LepeshevaDepartment of Biochemistry, Vanderbilt University School of Medicine, Nashville, TN.
Vanderbilt University · USSwansea University · GBWoods Hole Oceanographic Institution · USNorthwestern University · USTexas Tech University · US

Funding

Structural Requirements for Sterol 14alpha-DemethylasesR01GM067871 · NIGMS · VANDERBILT UNIVERSITY · PI LEPESHEVA, GALINA I · 2004 to 2023
$7.2M
The Nomenclature of Human and Vertebrate GenesU24HG003345 · NHGRI · UNIVERSITY OF CAMBRIDGE · PI Elspeth Bruford · 2018 to 2026
$3.9M
Nomenclature of Human and Vertebrate GenesU41HG003345 · NHGRI · EUROPEAN MOLECULAR BIOLOGY LABORATORY · PI BIRNEY, EWAN, BRUFORD, ELSPETH · 2013 to 2017
$2.4M
NHGRI NIH HHS U24 HG003345NHGRI NIH HHS U41 HG003345NIGMS NIH HHS R01 GM067871
6 · The paper itself

Abstract

Sterol biosynthesis, primarily associated with eukaryotic kingdoms of life, occurs as an abbreviated pathway in the bacterium Methylococcus capsulatus. Sterol 14α-demethylation is an essential step in this pathway and is catalyzed by cytochrome P450 51 (CYP51). In M. capsulatus, the enzyme consists of the P450 domain naturally fused to a ferredoxin domain at the C-terminus (CYP51fx). The structure of M. capsulatus CYP51fx was solved to 2.7 Å resolution and is the first structure of a bacterial sterol biosynthetic enzyme. The structure contained one P450 molecule per asymmetric unit with no electron density seen for ferredoxin. We connect this with the requirement of P450 substrate binding in order to activate productive ferredoxin binding. Further, the structure of the P450 domain with bound detergent (which replaced the substrate upon crystallization) was solved to 2.4 Å resolution. Comparison of these two structures to the CYP51s from human, fungi, and protozoa reveals strict conservation of the overall protein architecture. However, the structure of an "orphan" P450 from nonsterol-producing Mycobacterium tuberculosis that also has CYP51 activity reveals marked differences, suggesting that loss of function in vivo might have led to alterations in the structural constraints. Our results are consistent with the idea that eukaryotic and bacterial CYP51s evolved from a common cenancestor and that early eukaryotes may have recruited CYP51 from a bacterial source. The idea is supported by bioinformatic analysis, revealing the presence of CYP51 genes in >1,000 bacteria from nine different phyla, >50 of them being natural CYP51fx fusion proteins.

Indexed as

Evolution, MolecularAnimalsHumansMethylococcus capsulatusProtein ConformationSterol 14-DemethylaseSterol 14-DemethylasecrystallographyCYP51 redox partnercytochrome P450evolutionsterol biosynthesis

Identifiers

PMID33031537
PMCPMC7947880
OpenAlexW3091861600

What OpenQuestion holds

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LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.