ArticlePloS one2020
Complete plastome assemblies from a panel of 13 diverse potato taxa.
Article in PloS one, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.
What it found
Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.
The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.
The trial behind it
Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.
Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.
Who cites it
14 citing papers in PubMed, 25 citations in OpenAlex.
- Article
- Human selection maintains karyotype integrity of highly unstable genomic cultivated autotetraploid potato (Science advances · 2025Article
- Cytoplasmic and Nuclear Effects on Agronomic Traits in Diploid Interspecific Potato Hybrids.International journal of molecular sciences · 2025Article
- Mitochondrial gene editing and allotopic expression unveil the role of orf125 in the induction of male fertility in some Solanum spp. hybrids and in the evolution of the common potato.Plant biotechnology journal · 2025Article
- The phased Solanum okadae genome and Petota pangenome analysis of 23 other potato wild relatives and hybrids.Scientific data · 2024Article
- Potato soup: analysis of cultivated potato gene bank populations reveals high diversity and little structure.Frontiers in plant science · 2024Article
- Characterization and phylogenetic analysis of the chloroplast genome ofMitochondrial DNA. Part B, Resources · 2024Article
- Pangenome analyses reveal impact of transposable elements and ploidy on the evolution of potato species.Proceedings of the National Academy of Sciences of the United States of America · 2023Article
- Analysis of Genome Structure and Its Variations in Potato Cultivars Grown in Russia.International journal of molecular sciences · 2023Article
- Characterization of the plastome ofPhytoKeys · 2022Article
- 5S Ribosomal DNA of GenusFrontiers in plant science · 2022Article
- Plastaumatic: Automating plastome assembly and annotation.Frontiers in plant science · 2022Article
- Complete mitogenome assemblies from a panel of 13 diverse potato taxa.Mitochondrial DNA. Part B, Resources · 2021Article
- The complete plastome sequences of nine diploid potato clones.Mitochondrial DNA. Part B, Resources · 2021Article
Corrections and comments
PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.
Authors and funding
6 authors at 3 institutions in 2 countries.
Funding
No grant is acknowledged in the PubMed record.
Abstract
The chloroplasts are a crucial part of photosynthesizing plant cells and are extensively utilized in phylogenetic studies mainly due to their maternal inheritance. Characterization and analysis of complete plastome sequences is necessary to understand their diversity and evolutionary relationships. Here, a panel of thirteen plastomes from various potato taxa are presented. Though they are highly similar with respect to gene order and content, there is also a great extent of SNPs and InDels between them, with one of the Solanum bukasovii plastomes (BUK2) having the highest number of SNPs and InDels. Five different potato plastome types (C, S, A, W, W2) are present in the panel. Interestingly, the S. tuberosum subsp. tuberosum (TBR) accession has a W-type plastome, which is not commonly found in this species. The S-type plastome has a conserved 48 bp deletion not found in other types, which is responsible for the divergence of the S-type from the C-type plastome. Finally, a phylogenetic analysis shows that these plastomes cluster according to their types. Congruence between the nuclear genome and the plastome phylogeny of these accessions was seen, however with considerable differences, supporting the hypothesis of introgression and hybridization between potato species.
Indexed as
Identifiers
What OpenQuestion holds
Registered trials
Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.