Evidence map›Paper›PMID 33029991›Full record

ArticleJournal of biomedical optics2020

Photoacoustic image improvement based on a combination of sparse coding and filtering.

Ebrahim Najafzadeh, Parastoo Farnia, Saeedeh N Lavasani, Maryam Basij, Yan Yan, Hossein Ghadiri, Alireza Ahmadian, Mohammad Mehrmohammadi

Abstract read
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Article in Journal of biomedical optics, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Ebrahim NajafzadehTehran University of Medical Sciences, Medical Physics and Biomedical Engineering Department, Facult, Iran.
Parastoo FarniaTehran University of Medical Sciences, Medical Physics and Biomedical Engineering Department, Facult, Iran.
Saeedeh N LavasaniTehran University of Medical Sciences, Research Centre of Biomedical Technology and Robotics, Imam K, Iran.
Maryam BasijWayne State University, Department of Biomedical Engineering, Detroit, Michigan, United States.
Yan YanWayne State University, Department of Biomedical Engineering, Detroit, Michigan, United States.
Hossein GhadiriTehran University of Medical Sciences, Medical Physics and Biomedical Engineering Department, Facult, Iran.
Alireza AhmadianTehran University of Medical Sciences, Medical Physics and Biomedical Engineering Department, Facult, Iran.
Mohammad MehrmohammadiWayne State University, Department of Biomedical Engineering, Detroit, Michigan, United States.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

significancePhotoacoustic imaging (PAI) has been greatly developed in a broad range of diagnostic applications. The efficiency of light to sound conversion in PAI is limited by the ubiquitous noise arising from the tissue background, leading to a low signal-to-noise ratio (SNR), and thus a poor quality of images. Frame averaging has been widely used to reduce the noise; however, it compromises the temporal resolution of PAI.

aimWe propose an approach for photoacoustic (PA) signal denoising based on a combination of low-pass filtering and sparse coding (LPFSC). APPROACH: LPFSC method is based on the fact that PA signal can be modeled as the sum of low frequency and sparse components, which allows for the reduction of noise levels using a hybrid alternating direction method of multipliers in an optimization process.

resultsLPFSC method was evaluated using in-silico and experimental phantoms. The results show a 26% improvement in the peak SNR of PA signal compared to the averaging method for in-silico data. On average, LPFSC method offers a 63% improvement in the image contrast-to-noise ratio and a 33% improvement in the structural similarity index compared to the averaging method for objects located at three different depths, ranging from 10 to 20 mm, in a porcine tissue phantom.

conclusionsThe proposed method is an effective tool for PA signal denoising, whereas it ultimately improves the quality of reconstructed images, especially at higher depths, without limiting the image acquisition speed.

Indexed as

AlgorithmsAnimalsComputer SimulationPhantoms, ImagingSignal-To-Noise RatioSpectrum AnalysisSwinefilteringphotoacoustic imagingsignal denoisingsignal-to-noise ratiosparse codingtotal variation

Identifiers

PMID33029991
PMCPMC7540346

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.