Evidence map›Paper›PMID 33029677›Full record

ArticleInternational journal of computer assisted radiology and surgery2020

Enhanced registration of ultrasound volumes by segmentation of resection cavity in neurosurgical procedures.

Luca Canalini, Jan Klein, Dorothea Miller, Ron Kikinis

Open access · hybridAbstract read
In one paragraph

Article in International journal of computer assisted radiology and surgery, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed, 1 pooled it
0.8field-weighted citation impact, top 27% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 1 synthesis or guideline pooled it, 12 citations in OpenAlex.

  1. Pooled it
  2. Article
  3. Article
  4. Intraoperative MR Imaging during Glioma Resection.Magnetic resonance in medical sciences : MRMS : an official journal of Japan Society of Magnetic Resonance in Medicine · 2022
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 3 institutions in 2 countries.

Luca CanaliniFraunhofer MEVIS, Institute for Digital Medicine, Bremen, Germany. luca.canalini@mevis.fraunhofer.de.ORCID http://orcid.org/0000-0002-7142-0016
Jan KleinFraunhofer MEVIS, Institute for Digital Medicine, Bremen, Germany.
Dorothea MillerDepartment of Neurosurgery, University Hospital Knappschaftskrankenhaus, Bochum, Germany.
Ron KikinisSurgical Planning Laboratory, Brigham and Women's Hospital, Harvard Medical School, Boston, USA.
Fraunhofer Institute for Digital Medicine · DEBrigham and Women's Hospital · USUniversitätsklinikum Knappschaftskrankenhaus Bochum · DE

Funding

Training and DisseminationP41EB015902 · NIBIB · BRIGHAM AND WOMEN'S HOSPITAL · PI PUJOL, SONIA · 2012 to 2022
$20.9M
Image Guided Therapy Center - Ultrasound-based sensor system for the monitoring of COVID-19 patientsP41EB015898 · NIBIB · BRIGHAM AND WOMEN'S HOSPITAL · PI TEMPANY, CLARE M · 2012 to 2021
$18.9M
Lymph Node Quantification System for Multisite Clinical TrialsR01CA235589 · NCI · BRIGHAM AND WOMEN'S HOSPITAL · PI GORDON J HARRIS, Ron Kikinis · 2019 to 2026
$4.5M
H2020 Marie Skłodowska-Curie Actions 765148NCI NIH HHS R01 CA235589NIBIB NIH HHS P41 EB015898NIBIB NIH HHS P41 EB015902NIH HHS P41 EB015902
6 · The paper itself

Abstract

purposeNeurosurgeons can have a better understanding of surgical procedures by comparing ultrasound images obtained at different phases of the tumor resection. However, establishing a direct mapping between subsequent acquisitions is challenging due to the anatomical changes happening during surgery. We propose here a method to improve the registration of ultrasound volumes, by excluding the resection cavity from the registration process.

methodsThe first step of our approach includes the automatic segmentation of the resection cavities in ultrasound volumes, acquired during and after resection. We used a convolution neural network inspired by the 3D U-Net. Then, subsequent ultrasound volumes are registered by excluding the contribution of resection cavity.

resultsRegarding the segmentation of the resection cavity, the proposed method achieved a mean DICE index of 0.84 on 27 volumes. Concerning the registration of the subsequent ultrasound acquisitions, we reduced the mTRE of the volumes acquired before and during resection from 3.49 to 1.22 mm. For the set of volumes acquired before and after removal, the mTRE improved from 3.55 to 1.21 mm.

conclusionsWe proposed an innovative registration algorithm to compensate the brain shift affecting ultrasound volumes obtained at subsequent phases of neurosurgical procedures. To the best of our knowledge, our method is the first to exclude automatically segmented resection cavities in the registration of ultrasound volumes in neurosurgery.

Indexed as

AlgorithmsHumansImaging, Three-DimensionalNeural Networks, ComputerNeurosurgical ProceduresSurgery, Computer-AssistedUltrasonographyDeep learningImage-guided surgeryNeurosurgeryResection cavityUltrasound

Identifiers

PMID33029677
PMCPMC7671994
OpenAlexW3092058757

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.