Evidence map›Paper›PMID 33029258›Full record

ArticleDisease markers2020

eRNAs and Superenhancer lncRNAs Are Functional in Human Prostate Cancer.

Xiaona Zhang, Panpan Pang, Min Jiang, Qunfa Cao, Huili Li, Yi Xu, Yao Li, Xue Chen, Junsong Han

Open access · hybridAbstract read
In one paragraph

Article in Disease markers, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
1.0field-weighted citation impact, top 29% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 14 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Review
  5. Article
  6. Review
  7. Review
  8. Article
  9. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 4 institutions in 1 country.

Xiaona ZhangDepartment of Pathology, Tongji Hospital, Tongji University School of Medicine, Shanghai, China.
Panpan PangNational Engineering Center for Biochip at Shanghai, Shanghai, China.
Min JiangDepartment of Pathology, Tongji Hospital, Tongji University School of Medicine, Shanghai, China.
Qunfa CaoNational Engineering Center for Biochip at Shanghai, Shanghai, China.
Huili LiNational Engineering Center for Biochip at Shanghai, Shanghai, China.
Yi XuYueyang Hospital of Integrated Traditional Chinese and Western Medicine, Shanghai University of Chinese Medicine, Shanghai, China.
Yao LiShanghai Engineering Research Center of Industrial Microorganisms, School of Life Science, Fudan University, Shanghai, China.ORCID https://orcid.org/0000-0001-5257-7272
Xue ChenDepartment of Pathology, Tongji Hospital, Tongji University School of Medicine, Shanghai, China.ORCID https://orcid.org/0000-0002-2148-7132
Junsong HanNational Engineering Center for Biochip at Shanghai, Shanghai, China.ORCID https://orcid.org/0000-0002-9405-9382
Shanghai Center For Bioinformation Technology · CNTongji University · CNFudan University · CNShanghai University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Prostate cancer (PCa) is one of the most commonly diagnosed cancers in males worldwide. lncRNAs (long noncoding RNAs) play a significant role in the occurrence and development of PCa. eRNAs (enhancer RNAs) and SE-lncRNAs (superenhancer lncRNAs) are important elements of lncRNAs, but the role of eRNAs and SE-lncRNAs in PCa remains largely unclear. In this work, we identified 681 eRNAs and 292 SE-lncRNAs that were expressed differentially in PCa using a microarray. We also found that eRNAs transcribed from active open chromatin had significantly higher expression than those from active closed chromatin, and SE-lncRNAs had a little higher expression than eRNAs. Next, we constructed a transcriptional regulation network that eRNA-related enhancer and the target genes shared the same TF-binding motifs. Further, we investigated whether CTCF played a role in mediating the transcriptional regulation network. eRNAs, especially those that regulate androgen response genes, may be candidates for prognostic biomarkers and therapy targets. Our work provides a new perspective for developing medical treatments and therapies for prostate cancer.

Indexed as

Enhancer Elements, GeneticGene Expression Regulation, NeoplasticBiomarkers, TumorGene Expression ProfilingHumansMalePrognosisProstatic NeoplasmsRNA, Long NoncodingRNA, UntranslatedBiomarkers, TumorRNA, Long NoncodingRNA, Untranslated

Identifiers

PMID33029258
PMCPMC7532396
OpenAlexW3088077301

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.