Evidence map›Paper›PMID 33024967›Full record

ArticlebioRxiv : the preprint server for biology2020

Functional Landscape of SARS-CoV-2 Cellular Restriction.

Laura Martin-Sancho, Mary K Lewinski, Lars Pache, Charlotte A Stoneham, Xin Yin, Dexter Pratt, Christopher Churas, Sara B Rosenthal, Sophie Liu, Paul D De Jesus and 17 more

Open access · greenAbstract readPreprint
In one paragraph

Article in bioRxiv : the preprint server for biology, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed, 38 citations in OpenAlex.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

27 authors at 8 institutions in 2 countries.

Laura Martin-Sancho
Mary K Lewinski
Lars Pache
Charlotte A Stoneham
Dexter Pratt
Christopher Churas
Sara B Rosenthal
Sophie Liu
Paul D De Jesus
Alan M O'Neill
Anshu P Gounder
Courtney Nguyen
Yuan Pu
Aaron L Oom
Lisa Miorin
Ariel Rodriguez-Frandsen
Matthew Urbanowski
Megan L Shaw
Max W Chang
Christopher Benner
Matthew B Frieman
Adolfo García-Sastre
Judd F Hultquist
John Guatelli
Sumit K Chanda
Sanford Burnham Prebys Medical Discovery Institute · USUniversity of California San Diego · USVA San Diego Healthcare System · USIcahn School of Medicine at Mount Sinai · USNorthwestern University · USTisch Hospital · USUniversity of Maryland, Baltimore · USUniversity of the Western Cape · ZA

Funding

Tumor Environment and Metastasis (TEAM) Research ProgramP30CA060553 · NCI · NORTHWESTERN UNIVERSITY AT CHICAGO · PI Daniela E Matei · 1993 to 2026
$153.9M
The Institute for Translational MedicineUL1TR002389 · NCATS · UNIVERSITY OF CHICAGO · PI Joshua J Jacobs, DAVID O MELTZER · 2017 to 2026
$71.6M
Northwestern University Clinical and Translational Science Institute (NUCATS)UL1TR001422 · NCATS · NORTHWESTERN UNIVERSITY AT CHICAGO · PI D'AQUILA, RICHARD · 2015 to 2023
$56.8M
HOPE Training GrantT32AI007384 · NIAID · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI Sara Gianella Weibel, Scott L Letendre · 1990 to 2026
$9.7M
HIV-1 Vpu and BST-2/CD317R37AI081668 · NIAID · VETERANS MEDICAL RESEARCH FDN/SAN DIEGO · PI GUATELLI, JOHN C. · 2014 to 2023
$4.8M
NCATS NIH HHS UL1 TR001422NCATS NIH HHS UL1 TR002389NCI NIH HHS P30 CA060553NIAID NIH HHS R37 AI081668
6 · The paper itself

Abstract

A deficient interferon response to SARS-CoV-2 infection has been implicated as a determinant of severe COVID-19. To identify the molecular effectors that govern interferon control of SARS-CoV-2 infection, we conducted a large-scale gain-of-function analysis that evaluated the impact of human interferon stimulated genes (ISGs) on viral replication. A limited subset of ISGs were found to control viral infection, including endosomal factors that inhibited viral entry, nucleic acid binding proteins that suppressed viral RNA synthesis, and a highly enriched cluster of ER and Golgi-resident ISGs that inhibited viral translation and egress. These included the type II integral membrane protein BST2/tetherin, which was found to impede viral release, and is targeted for immune evasion by SARS-CoV-2 Orf7a protein. Overall, these data define the molecular basis of early innate immune control of viral infection, which will facilitate the understanding of host determinants that impact disease severity and offer potential therapeutic strategies for COVID-19.

Identifiers

PMID33024967
PMCPMC7536870
OpenAlexW3090780294

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.