Evidence map›Paper›PMID 33024134›Full record

ArticleScientific reports2020

'Candidatus Liberibacter solanacearum' distribution and diversity in Scotland and the characterisation of novel haplotypes from Craspedolepta spp. (Psyllidae: Aphalaridae).

Jason C Sumner-Kalkun, Fiona Highet, Yvonne M Arnsdorf, Emma Back, Mairi Carnegie, Siobhán Madden, Silvia Carboni, William Billaud, Zoë Lawrence, David Kenyon

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed
4.2field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed, 28 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 6 institutions in 3 countries.

Jason C Sumner-KalkunSASA, Roddinglaw Road, Edinburgh, EH12 9FJ, Midlothian, UK. jason.sumner-kalkun@sasa.gov.scot.
Fiona HighetSASA, Roddinglaw Road, Edinburgh, EH12 9FJ, Midlothian, UK.
Yvonne M ArnsdorfSASA, Roddinglaw Road, Edinburgh, EH12 9FJ, Midlothian, UK.
Emma BackSASA, Roddinglaw Road, Edinburgh, EH12 9FJ, Midlothian, UK.
Mairi CarnegieSASA, Roddinglaw Road, Edinburgh, EH12 9FJ, Midlothian, UK.
Siobhán MaddenUniversity of Glasgow, Glasgow, G12 8QQ, UK.
Silvia CarboniDipartimento Di Agraria, Universita Degli Studi Di Sassari, Viale, Italia 39, 07100, Sassari, Italy.
William BillaudINRAE, GAFL, 84140, Montfavet, France.
Zoë LawrenceSASA, Roddinglaw Road, Edinburgh, EH12 9FJ, Midlothian, UK.
David KenyonSASA, Roddinglaw Road, Edinburgh, EH12 9FJ, Midlothian, UK.
Scottish Agricultural Science Agency · GBBuilding Research Establishment · GBUniversity of Edinburgh · GBInstitut National de Recherche pour l'Agriculture, l'Alimentation et l'Environnement · FRUniversity of Glasgow · GBUniversity of Sassari · IT

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The phloem limited bacterium 'Candidatus Liberibacter solanacearum' (Lso) is associated with disease in Solanaceous and Apiaceous crops. This bacterium has previously been found in the UK in Trioza anthrisci, but its impact on UK crops is unknown. Psyllid and Lso diversity and distribution among fields across the major carrot growing areas of Scotland were assessed using real-time PCR and DNA barcoding techniques. Four Lso haplotypes were found: C, U, and two novel haplotypes. Lso haplotype C was also found in a small percentage of asymptomatic carrot plants (9.34%, n = 139) from a field in Milnathort where known vectors of this haplotype were not found. This is the first report of Lso in cultivated carrot growing in the UK and raises concern for the carrot and potato growing industry regarding the potential spread of new and existing Lso haplotypes into crops. Trioza anthrisci was found present only in sites in Elgin, Moray with 100% of individuals harbouring Lso haplotype C. Lso haplotype U was found at all sites infecting Trioza urticae and at some sites infecting Urtica dioica with 77.55% and 24.37% average infection, respectively. The two novel haplotypes were found in Craspedolepta nebulosa and Craspedolepta subpunctata and named Cras1 and Cras2. This is the first report of Lso in psyllids from the Aphalaridae. These new haplotypes were most closely related to Lso haplotype H recently found in carrot and parsnip. Lso was also detected in several weed plants surrounding carrot and parsnip fields. These included two Apiaceous species Aegropodium podagraria (hap undetermined) and Anthriscus sylvestris (hap C); one Gallium sp. (Rubiaceae) (hap undetermined); and Chenopodium album (Amaranthaceae) (hap undetermined).

Indexed as

HaplotypesAnimalsApiaceaeCrops, AgriculturalHemipteraLiberibacterPlant DiseasesScotlandSolanaceaeUrtica dioica

Identifiers

PMID33024134
PMCPMC7538894
OpenAlexW3092169203

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.