Evidence map›Paper›PMID 33024122›Full record

ArticleNature communications2020

Adaptation and selection shape clonal evolution of tumors during residual disease and recurrence.

Andrea Walens, Jiaxing Lin, Jeffrey S Damrauer, Brock McKinney, Ryan Lupo, Rachel Newcomb, Douglas B Fox, Nathaniel W Mabe, Jeremy Gresham, Zhecheng Sheng and 6 more

Open access · goldAbstract read
In one paragraph

Article in Nature communications, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 33 papers.

0numbers the graph read from it
0cells of the map it votes in
33citing papers in PubMed
2.1field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

33 citing papers in PubMed, 47 citations in OpenAlex.

  1. Trial
  2. Review
  3. Article
  4. Article
  5. Targeting tumor transition windows.Exploration of targeted anti-tumor therapy · 2026
    Review
  6. Review
  7. Article
  8. Article
  9. Article
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  11. Article
  12. Review
  13. Article
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  15. Article
  16. Review
  17. Review
  18. Dormancy in Breast Cancer.Cold Spring Harbor perspectives in medicine · 2023
    Review
  19. Beyond Neoantigens: Antigens Derived from Tumor Drivers as Cancer Vaccine Targets.Clinical cancer research : an official journal of the American Association for Cancer Research · 2023
    Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

16 authors at 2 institutions in 1 country.

Andrea Walens *Department of Pharmacology and Cancer Biology, Duke University, Durham, NC, 27710, USA.ORCID http://orcid.org/0000-0001-8706-563X
Jiaxing Lin *Department of Biostatistics and Bioinformatics, Duke University, Durham, NC, 27710, USA.
Jeffrey S Damrauer *Department of Pharmacology and Cancer Biology, Duke University, Durham, NC, 27710, USA.ORCID http://orcid.org/0000-0001-8148-0285
Brock McKinneyDepartment of Pharmacology and Cancer Biology, Duke University, Durham, NC, 27710, USA.
Ryan LupoDepartment of Pharmacology and Cancer Biology, Duke University, Durham, NC, 27710, USA.
Rachel NewcombDepartment of Pharmacology and Cancer Biology, Duke University, Durham, NC, 27710, USA.
Douglas B FoxDepartment of Pharmacology and Cancer Biology, Duke University, Durham, NC, 27710, USA.ORCID http://orcid.org/0000-0003-3678-927X
Nathaniel W MabeDepartment of Pharmacology and Cancer Biology, Duke University, Durham, NC, 27710, USA.ORCID http://orcid.org/0000-0003-2675-652X
Jeremy GreshamDuke Cancer Institute, Duke University, Durham, NC, 27710, USA.
Zhecheng ShengDuke Cancer Institute, Duke University, Durham, NC, 27710, USA.
Alexander B SibleyDuke Cancer Institute, Duke University, Durham, NC, 27710, USA.ORCID http://orcid.org/0000-0003-4552-1865
Tristan De BuysscherLineberger Comprehensive Cancer Center, University of North Carolina, Chapel Hill, NC, 27599, USA.
Hemant KelkarDepartment of Genetics, University of North Carolina, Chapel Hill, NC, 27599, USA.
Piotr A MieczkowskiLineberger Comprehensive Cancer Center, University of North Carolina, Chapel Hill, NC, 27599, USA.
Kouros OwzarDepartment of Biostatistics and Bioinformatics, Duke University, Durham, NC, 27710, USA.
James V AlvarezDepartment of Pharmacology and Cancer Biology, Duke University, Durham, NC, 27710, USA. james.alvarez@duke.edu.ORCID http://orcid.org/0000-0003-2910-7621
Duke University · USUniversity of North Carolina at Chapel Hill · US

Funding

Par-4 Regulation and Function in Breast Cancer Dormancy and RecurrenceR01CA208042 · NCI · FRED HUTCHINSON CANCER RESEARCH CENTER · PI ALVAREZ, JAMES V · 2016 to 2020
$2.1M
Awakening the dormant tumor: the role of the tumor microenvironment in breast cancer recurrenceF31CA220957 · NCI · DUKE UNIVERSITY · PI WALENS, ANDREA NICOLE · 2017 to 2018
$69k
NCI NIH HHS F31 CA220957NCI NIH HHS R01 CA208042
6 · The paper itself

Abstract

The survival and recurrence of residual tumor cells following therapy constitutes one of the biggest obstacles to obtaining cures in breast cancer, but it remains unclear how the clonal composition of tumors changes during relapse. We use cellular barcoding to monitor clonal dynamics during tumor recurrence in vivo. We find that clonal diversity decreases during tumor regression, residual disease, and recurrence. The recurrence of dormant residual cells follows several distinct routes. Approximately half of the recurrent tumors exhibit clonal dominance with a small number of subclones comprising the vast majority of the tumor; these clonal recurrences are frequently dependent upon Met gene amplification. A second group of recurrent tumors comprises thousands of subclones, has a clonal architecture similar to primary tumors, and is dependent upon the Jak/Stat pathway. Thus the regrowth of dormant tumors proceeds via multiple routes, producing recurrent tumors with distinct clonal composition, genetic alterations, and drug sensitivities.

Indexed as

Gene Expression Regulation, NeoplasticAnimalsBreast NeoplasmsCell Line, TumorCrizotinibDoxycyclineEpithelial-Mesenchymal TransitionErb-b2 Receptor Tyrosine KinasesFemaleHigh-Throughput Nucleotide SequencingHumansLung NeoplasmsMice, NudeNeoplasm Recurrence, LocalProto-Oncogene Proteins c-metSingle-Cell AnalysisCrizotinibDoxycyclineERBB2 protein, humanErb-b2 Receptor Tyrosine KinasesProto-Oncogene Proteins c-met

Identifiers

PMID33024122
PMCPMC7539014
OpenAlexW3092622014

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.