Evidence map›Paper›PMID 33024114›Full record

ArticleNature communications2020

The Rho-GEF PIX-1 directs assembly or stability of lateral attachment structures between muscle cells.

Jasmine C Moody, Hiroshi Qadota, April R Reedy, C Denise Okafor, Niveda Shanmugan, Yohei Matsunaga, Courtney J Christian, Eric A Ortlund, Guy M Benian

Open access · goldAbstract read
In one paragraph

Article in Nature communications, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
0.7field-weighted citation impact, top 35% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 10 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 2 institutions in 1 country.

Jasmine C MoodyDepartment of Pathology, Emory University, Atlanta, GA, 30322, USA.ORCID http://orcid.org/0000-0002-0465-0647
Hiroshi QadotaDepartment of Pathology, Emory University, Atlanta, GA, 30322, USA.
April R ReedyDepartment of Pathology, Emory University, Atlanta, GA, 30322, USA.
C Denise OkaforDepartment of Biochemistry, Emory University, Atlanta, GA, 30322, USA.
Niveda ShanmuganDepartment of Pathology, Emory University, Atlanta, GA, 30322, USA.
Yohei MatsunagaDepartment of Pathology, Emory University, Atlanta, GA, 30322, USA.
Courtney J ChristianDepartment of Pathology, Emory University, Atlanta, GA, 30322, USA.
Eric A OrtlundDepartment of Biochemistry, Emory University, Atlanta, GA, 30322, USA.ORCID http://orcid.org/0000-0001-8855-3029
Guy M BenianDepartment of Pathology, Emory University, Atlanta, GA, 30322, USA. pathgb@emory.edu.ORCID http://orcid.org/0000-0002-8236-3176
Emory University · USEmory Healthcare · US

Funding

Enhancing and expanding the CGC Strain CollectionP40OD010440 · OD · UNIVERSITY OF MINNESOTA · PI Aric L Daul, Ann E. Rougvie · 2012 to 2026
$7.5M
Targeting the orphan nuclear receptor LRH-1 with small moleculesR01DK115213 · NIDDK · EMORY UNIVERSITY · PI John Winter Calvert, Eric A Ortlund · 2017 to 2026
$4.6M
Role of UNC-89 (obscurin) in sarcomere assembly and maintenance.R01AR064307 · NIAMS · EMORY UNIVERSITY · PI BENIAN, GUY MARTIN · 2014 to 2018
$1.7M
Measuring and improving specialty care coordination in VAIK2HX002137 · VA · EDITH NOURSE ROGERS MEMORIAL VETERANS HOSPITAL · PI VIMALANANDA, VARSHA · 2018 to 2022
–
HSRD VA IK2 HX002137NIAMS NIH HHS R01 AR064307NIDDK NIH HHS R01 DK115213NIH HHS P40 OD010440
6 · The paper itself

Abstract

PIX proteins are guanine nucleotide exchange factors (GEFs) that activate Rac and Cdc42, and are known to have numerous functions in various cell types. Here, we show that a PIX protein has an important function in muscle. From a genetic screen in C. elegans, we found that pix-1 is required for the assembly of integrin adhesion complexes (IACs) at borders between muscle cells, and is required for locomotion of the animal. A pix-1 null mutant has a reduced level of activated Rac in muscle. PIX-1 localizes to IACs at muscle cell boundaries, M-lines and dense bodies. Mutations in genes encoding proteins at known steps of the PIX signaling pathway show defects at muscle cell boundaries. A missense mutation in a highly conserved residue in the RacGEF domain results in normal levels of PIX-1 protein, but a reduced level of activated Rac in muscle, and abnormal IACs at muscle cell boundaries.

Indexed as

AnimalsAnimals, Genetically ModifiedCaenorhabditis elegansCaenorhabditis elegans ProteinsCarrier ProteinsGene Expression RegulationLocomotionMolecular Dynamics SimulationMuscle CellsMusclesMutationProtein Domainsrac GTP-Binding ProteinsRho Guanine Nucleotide Exchange FactorsSarcomeresARHGEF7 protein, humanCaenorhabditis elegans ProteinsCarrier ProteinsCED-10 protein, C elegansPIX-1 protein, C elegansrac GTP-Binding ProteinsRho Guanine Nucleotide Exchange Factors

Identifiers

PMID33024114
PMCPMC7538588
OpenAlexW3092103408

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.