Evidence map›Paper›PMID 33023073›Full record

ArticleInternational journal of molecular sciences2020

Phosphoproteomics and Bioinformatics Analyses Reveal Key Roles of GSK-3 and AKAP4 in Mouse Sperm Capacitation.

Nailis Syifa, Jhih-Tian Yang, Chang-Shiann Wu, Miao-Hsia Lin, Wan-Ling Wu, Cheng-Wei Lai, Sheng-Hsuan Ku, Suh-Yuen Liang, Yu-Chun Hung, Chia-Te Chou and 5 more

Open access · goldAbstract read
In one paragraph

Article in International journal of molecular sciences, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
1.0field-weighted citation impact, top 22% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 10 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors at 6 institutions in 3 countries.

Nailis SyifaDivision of Clinical Pharmacy, School of Pharmacy, College of Pharmacy, Taipei Medical University, Taipei 110, Taiwan.ORCID 0000-0001-7731-1139
Jhih-Tian YangPh.D. Program in Microbial Genomics, National Chung Hsing University and Academia Sinica, Taichung 40227, Taiwan.
Chang-Shiann WuDepartment of Information Management, National Formosa University, Yunlin County 632, Taiwan.
Miao-Hsia LinGraduate School of Pharmaceutical Sciences, Kyoto University, Kyoto 606-8501, Japan.
Wan-Ling WuInstitute of Biological Chemistry, Academia Sinica, Taipei 115, Taiwan.
Cheng-Wei LaiDivision of Clinical Pharmacy, School of Pharmacy, College of Pharmacy, Taipei Medical University, Taipei 110, Taiwan.
Sheng-Hsuan KuDivision of Clinical Pharmacy, School of Pharmacy, College of Pharmacy, Taipei Medical University, Taipei 110, Taiwan.
Suh-Yuen LiangInstitute of Biological Chemistry, Academia Sinica, Taipei 115, Taiwan.
Yu-Chun HungDivision of Clinical Pharmacy, School of Pharmacy, College of Pharmacy, Taipei Medical University, Taipei 110, Taiwan.
Chia-Te ChouDivision of Clinical Pharmacy, School of Pharmacy, College of Pharmacy, Taipei Medical University, Taipei 110, Taiwan.
Chien-Sheng WangDivision of Clinical Pharmacy, School of Pharmacy, College of Pharmacy, Taipei Medical University, Taipei 110, Taiwan.
Yasushi IshihamaGraduate School of Pharmaceutical Sciences, Kyoto University, Kyoto 606-8501, Japan.ORCID 0000-0001-7714-203X
Jiahn-Haur LiaoInstitute of Biological Chemistry, Academia Sinica, Taipei 115, Taiwan.
Shih-Hsiung WuInstitute of Biological Chemistry, Academia Sinica, Taipei 115, Taiwan.
Tzu-Hua WuDivision of Clinical Pharmacy, School of Pharmacy, College of Pharmacy, Taipei Medical University, Taipei 110, Taiwan.ORCID 0000-0002-3631-6248
Taipei Medical University · TWInstitute of Biological Chemistry, Academia Sinica · TWKyoto University · JPNational Chung Hsing University · TWNational Formosa University · TWUniversitas Muhammadiyah Jember · ID

Funding

Ministry of Science and Technology, Taiwan MOST-103-2113-M-001-029-MY3Ministry of Science and Technology, Taiwan MOST-103-2325-B-001-020Ministry of Science and Technology, Taiwan MOST104-2320-B-038-018Ministry of Science and Technology, Taiwan MOST-104-2325-B-001-003Ministry of Science and Technology, Taiwan MOST105-0210-01-12-01Ministry of Science and Technology, Taiwan MOST106-0210-01-15-04Ministry of Science and Technology, Taiwan MOST107-0210-01-19-02Ministry of Science and Technology, Taiwan NSC101-2313-B-038-003Ministry of Science and Technology, Taiwan NSC-101-2923-B-001-005-MY3Ministry of Science and Technology, Taiwan NSC98-2313-B-038-002-MY3
6 · The paper itself

Abstract

Protein phosphorylation can induce signal transduction to change sperm motility patterns during sperm capacitation. However, changes in the phosphorylation of sperm proteins in mice are still incompletely understood. Here, capacitation-related phosphorylation in mouse sperms were firstly investigated by label-free quantitative (LFQ) phosphoproteomics coupled with bioinformatics analysis using ingenuity pathway analysis (IPA) methods such as canonical pathway, upstream regulator, and network analysis. Among 1632 phosphopeptides identified at serine, threonine, and tyrosine residues, 1050 novel phosphosites, corresponding to 402 proteins, were reported. Gene heatmaps for IPA canonical pathways showed a novel role for GSK-3 in GP6 signaling pathways associated with capacitation for 60 min. At the same time, the reduction of the abundant isoform-specific GSK-3α expression was shown by western blot (WB) while the LFQ pY of this isoform slightly decreased and then increased. The combined results from WB and LFQ methods explain the less inhibitory phosphorylation of GSK-3α during capacitation and also support the predicted increases in its activity. In addition, pAKAP4 increased at the Y156 site but decreased at the Y811 site in a capacitated state, even though IPA network analysis and WB analysis for overall pAKAP revealed upregulated trends. The potential roles of GSK-3 and AKAP4 in fertility are discussed.

Indexed as

ProteomicsA Kinase Anchor ProteinsAnimalsComputational BiologyGene Expression Regulation, DevelopmentalGlycogen Synthase Kinase 3MaleMicePhosphoproteinsPhosphorylationSignal TransductionSpermatozoaSperm CapacitationAkap4 protein, mouseA Kinase Anchor ProteinsGlycogen Synthase Kinase 3PhosphoproteinsAKAP4bioinformaticscapacitationGSK-3IPAmousesperm

Identifiers

PMID33023073
PMCPMC7582274
OpenAlexW3089964870

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.