Evidence map›Paper›PMID 33022895›Full record

ArticleFEBS open bio2020

Intracellular microRNA expression patterns influence cell death fates for both necrosis and apoptosis.

Akira Sato, Akihiro Yamamoto, Akira Shimotsuma, Yoko Ogino, Naoki Funayama, Yui Takahashi, Akiko Hiramoto, Yusuke Wataya, Hye-Sook Kim

Open access · goldAbstract read
In one paragraph

Article in FEBS open bio, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
0.3field-weighted citation impact, top 49% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 5 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 2 institutions in 1 country.

Akira SatoDepartment of Biochemistry, Faculty of Pharmaceutical Sciences, Tokyo University of Science, Chiba, Japan.ORCID 0000-0002-2239-6208
Akihiro YamamotoDivision of International Infectious Disease Control, Faculty of Pharmaceutical Sciences, Okayama University, Okayama, Japan.
Akira ShimotsumaDepartment of Biochemistry, Faculty of Pharmaceutical Sciences, Tokyo University of Science, Chiba, Japan.
Yoko OginoDepartment of Biochemistry, Faculty of Pharmaceutical Sciences, Tokyo University of Science, Chiba, Japan.
Naoki FunayamaDepartment of Biochemistry, Faculty of Pharmaceutical Sciences, Tokyo University of Science, Chiba, Japan.
Yui TakahashiDepartment of Biochemistry, Faculty of Pharmaceutical Sciences, Tokyo University of Science, Chiba, Japan.
Akiko HiramotoDivision of International Infectious Disease Control, Faculty of Pharmaceutical Sciences, Okayama University, Okayama, Japan.
Yusuke WatayaDivision of International Infectious Disease Control, Faculty of Pharmaceutical Sciences, Okayama University, Okayama, Japan.
Hye-Sook KimDivision of International Infectious Disease Control, Faculty of Pharmaceutical Sciences, Okayama University, Okayama, Japan.
Tokyo University of Science · JPOkayama University · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

MicroRNAs (miRNAs) are small noncoding RNA molecules that interact with target mRNAs at specific sites to induce cleavage of the mRNA or inhibit translation. Such miRNAs play a vital role in gene expression and in several other biological processes, including cell death. We have studied the mechanisms regulating cell death (necrosis in original F28-7 cells and apoptosis in their variant F28-7-A cells) in the mouse mammary tumor cell line FM3A using the anticancer agent floxuridine (FUdR). We previously reported that inhibition of heat-shock protein 90 by the specific inhibitor geldanamycin (GA) in F28-7 cells causes a shift from necrosis to apoptosis. In this study, we investigated the intracellular miRNA expression profiles of FUdR-treated F28-7 cells (necrotic condition), GA plus FUdR-treated F28-7 cells (apoptotic condition), and FUdR-treated F28-7-A cells (apoptotic condition) through miRNA microarray analysis. In addition, we knocked down Dicer, a key molecule for the expression of mature miRNAs, in F28-7 cells to examine whether it modulates FUdR-induced cell death. Our analysis revealed that the miRNA expression patterns differ significantly between these cell death conditions. Furthermore, we identified miRNA candidates that regulate cell death. Knockdown of Dicer in FUdR-treated necrosis-fated cells caused a partial shift from necrosis to apoptosis. These findings suggest that modulation of miRNA expression patterns influences the decision of cell death fate toward necrosis or apoptosis. Our findings may serve as a basis for further study of the functions of miRNAs in cell death mechanisms.

Indexed as

Gene Expression RegulationAnimalsApoptosisBenzoquinonesCell Line, TumorDown-RegulationFloxuridineGene Expression ProfilingGene SilencingIntracellular SpaceLactams, MacrocyclicMiceMicroRNAsNecrosisRibonuclease IIIBenzoquinonesFloxuridinegeldanamycinLactams, MacrocyclicMicroRNAsRibonuclease IIIapoptosisdicerfloxuridinegeldanamycinmicroRNA expressionnecrosis

Identifiers

PMID33022895
PMCPMC7609763
OpenAlexW3092000485

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.