Evidence map›Paper›PMID 33022052›Full record

ArticleRadiation research2020

The RABiT-II DCA in the Rhesus Macaque Model.

Ekaterina Royba, Mikhail Repin, Adayabalam S Balajee, Igor Shuryak, Sergey Pampou, Charles Karan, David J Brenner, Guy Garty

Abstract read
In one paragraph

Article in Radiation research, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed.

  1. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Ekaterina RoybaCenter for Radiological Research, Columbia University Irving Medical Center, New York, New York 10032.
Mikhail RepinCenter for Radiological Research, Columbia University Irving Medical Center, New York, New York 10032.
Adayabalam S BalajeeRadiation Emergency Assistance Center/ Training Site (REAC/TS), Cytogenetic Biodosimetry Laboratory (CBL), Oak Ridge Institute for Science and Education, Oak Ridge Associated Universities, Oak Ridge, Tennessee 37830.
Igor ShuryakCenter for Radiological Research, Columbia University Irving Medical Center, New York, New York 10032.
Sergey PampouJP Sulzberger Columbia Genome Center, High-Throughput Screening Center, New York, New York 10032.
Charles KaranJP Sulzberger Columbia Genome Center, High-Throughput Screening Center, New York, New York 10032.
David J BrennerCenter for Radiological Research, Columbia University Irving Medical Center, New York, New York 10032.
Guy GartyCenter for Radiological Research, Columbia University Irving Medical Center, New York, New York 10032.

Funding

Sample Engineering CoreU19AI067773 · NIAID · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI FORNACE, ALBERT J · 2005 to 2024
$105.4M
NIAID NIH HHS HHSN272201600040CNIAID NIH HHS U19 AI067773
6 · The paper itself

Abstract

An automated platform for cytogenetic biodosimetry, the "Rapid Automated Biodosimetry Tool II (RABiT-II)," adapts the dicentric chromosome assay (DCA) for high-throughput mass-screening of the population after a large-scale radiological event. To validate this test, the U.S. Federal Drug Administration (FDA) recommends demonstrating that the high-throughput biodosimetric assay in question correctly reports the dose in an in vivo model. Here we describe the use of rhesus macaques (Macaca mulatta) to augment human studies and validate the accuracy of the high-throughput version of the DCA. To perform analysis, we developed the 17/22-mer peptide nucleic acid (PNA) probes that bind to the rhesus macaque's centromeres. To our knowledge, these are the first custom PNA probes with high specificity that can be used for chromosome analysis in M. mulatta. The accuracy of fully-automated chromosome analysis was improved by optimizing a low-temperature telomere PNA FISH staining in multiwell plates and adding the telomere detection feature to our custom chromosome detection software, FluorQuantDic V4. The dicentric frequencies estimated from in vitro irradiated rhesus macaque samples were compared to human blood samples of individuals subjected to the same ex vivo irradiation conditions. The results of the RABiT-II DCA analysis suggest that, in the lymphocyte system, the dose responses to gamma radiation in the rhesus macaques were similar to those in humans, with small but statistically significant differences between these two model systems.

Indexed as

Macaca mulattaAnimalsChromosome AberrationsHumansModels, AnimalPeptide Nucleic AcidsRadiometryPeptide Nucleic Acids

Identifiers

PMID33022052
PMCPMC9039759

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.