Evidence map›Paper›PMID 33021864›Full record

ArticleAutophagy2021

Membrane dynamics and protein targets of lipid droplet microautophagy during ER stress-induced proteostasis in the budding yeast,

Enrique J Garcia, Pin-Chao Liao, Gary Tan, Jason D Vevea, Cierra N Sing, Catherine A Tsang, J Michael McCaffery, Istvan R Boldogh, Liza A Pon

Open access · bronzeAbstract read
In one paragraph

Article in Autophagy, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 36 papers.

0numbers the graph read from it
0cells of the map it votes in
36citing papers in PubMed
3.0field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

36 citing papers in PubMed, 56 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 3 institutions in 1 country.

Enrique J GarciaDepartment of Pathology and Cell Biology, Columbia University, New York, NY, USA.
Pin-Chao LiaoDepartment of Pathology and Cell Biology, Columbia University, New York, NY, USA.
Gary TanDepartment of Pathology and Cell Biology, Columbia University, New York, NY, USA.ORCID 0000-0001-9528-0508
Jason D VeveaHHMI and Department of Neuroscience, University of Wisconsin, Madison, Wisconsin, USA.ORCID 0000-0002-3068-973X
Cierra N SingInstitute of Human Nutrition, Columbia University, New York, NY, USA.
Catherine A TsangDepartment of Pathology and Cell Biology, Columbia University, New York, NY, USA.
J Michael McCafferyIntegrated Imaging Center, Department of Biology, The Johns Hopkins University, Baltimore, MD, USA.ORCID 0000-0001-7153-9933
Istvan R BoldoghDepartment of Pathology and Cell Biology, Columbia University, New York, NY, USA.
Liza A PonDepartment of Pathology and Cell Biology, Columbia University, New York, NY, USA.
Columbia University · USJohns Hopkins University · USUniversity of Wisconsin–Madison · US

Funding

Tumor Biology and Microenvironment ProgramP30CA013696 · NCI · COLUMBIA UNIV NEW YORK MORNINGSIDE · PI Anil K Rustgi · 1985 to 2026
$115.3M
MEDICAL SCIENTIST TRAINING PROGRAMT32GM007367 · NIGMS · COLUMBIA UNIV NEW YORK MORNINGSIDE · PI REINER, STEVEN L · 1985 to 2021
$25.1M
Mitochondrial inheritance and quality controlR35GM122589 · NIGMS · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI Liza A Pon · 2017 to 2026
$5.1M
MITOCHONDRIAL MOTILITY AND INHERITANCER01GM045735 · NIGMS · COLUMBIA UNIV NEW YORK MORNINGSIDE · PI PON, LIZA A · 1993 to 2016
$4.2M
The Role of Actin in Cellular AgingR33AG051047 · NIA · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI PON, LIZA A · 2018 to 2020
$1.4M
FEI Tecnai 12 BioTWIN Transmission Electron MicroscopeS10RR023454 · NCRR · JOHNS HOPKINS UNIVERSITY · PI MCCAFFERY, J. MICHAEL · 2007 to 2007
$476k
The Role of Actin in Cellular AgingR21AG051047 · NIA · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI PON, LIZA A · 2016 to 2017
$427k
Molecular and Therapeutic Mechanisms of a new model of Congenital Muscular DystrophyF31AR070013 · NIAMS · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI GARCIA, ENRIQUE JOSE · 2016 to 2019
$190k
Mitochondria-cytoskeleton communication and function in agingF31AG055326 · NIA · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI SING, CIERRA NICOLE · 2016 to 2020
$179k
Howard Hughes Medical Institute 56006760NCI NIH HHS P30 CA013696NCRR NIH HHS S10 RR023454NIAMS NIH HHS F31 AR070013NIA NIH HHS F31 AG055326NIA NIH HHS R21 AG051047NIA NIH HHS R33 AG051047NIGMS NIH HHS R01 GM045735NIGMS NIH HHS R35 GM122589NIGMS NIH HHS T32 GM007367
6 · The paper itself

Abstract

Our previous studies reveal a mechanism for lipid droplet (LD)-mediated proteostasis in the endoplasmic reticulum (ER) whereby unfolded proteins that accumulate in the ER in response to lipid imbalance-induced ER stress are removed by LDs and degraded by microlipophagy (µLP), autophagosome-independent LD uptake into the vacuole (the yeast lysosome). Here, we show that dithiothreitol- or tunicamycin-induced ER stress also induces µLP and identify an unexpected role for vacuolar membrane dynamics in this process. All stressors studied induce vacuolar fragmentation prior to µLP. Moreover, during µLP, fragmented vacuoles fuse to form cup-shaped structures that encapsulate and ultimately take up LDs. Our studies also indicate that proteins of the endosome sorting complexes required for transport (ESCRT) are upregulated, required for µLP, and recruited to LDs, vacuolar membranes, and sites of vacuolar membrane scission during µLP. We identify possible target proteins for LD-mediated ER proteostasis. Our live-cell imaging studies reveal that one potential target (Nup159) localizes to punctate structures that colocalizes with LDs 1) during movement from ER membranes to the cytosol, 2) during microautophagic uptake into vacuoles, and 3) within the vacuolar lumen. Finally, we find that mutations that inhibit LD biogenesis, homotypic vacuolar membrane fusion or ESCRT function inhibit stress-induced autophagy of Nup159 and other ER proteins. Thus, we have obtained the first direct evidence that LDs and µLP can mediate ER stress-induced ER proteostasis, and identified direct roles for ESCRT and vacuolar membrane fusion in that process.

Indexed as

Saccharomyces cerevisiae ProteinsSaccharomycetalesAutophagyLipid DropletsMicroautophagyNuclear Pore Complex ProteinsProteostasisSaccharomyces cerevisiaeVacuolesNuclear Pore Complex ProteinsNUP159 protein, S cerevisiaeSaccharomyces cerevisiae ProteinseradER stressescrtlipid droplet proteomemicroautophagymicrolipophagyunfolded protein responsevacuolar membrane fusionvacuole

Identifiers

PMID33021864
PMCPMC8496710
OpenAlexW3091863200

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.