Evidence map›Paper›PMID 33021471›Full record

ArticleeLife2020

Nuclear crowding and nonlinear diffusion during interkinetic nuclear migration in the zebrafish retina.

Afnan Azizi, Anne Herrmann, Yinan Wan, Salvador Jrp Buse, Philipp J Keller, Raymond E Goldstein, William A Harris

Open access · goldAbstract read
In one paragraph

Article in eLife, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
1.7field-weighted citation impact, top 18% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 26 citations in OpenAlex.

  1. Article
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  3. Article
  4. Article
  5. Article
  6. Article
  7. The mechanical forces that shape our senses.Development (Cambridge, England) · 2022
    Review
  8. Article
  9. Review
  10. Nde1 and Ndel1: Outstanding Mysteries in Dynein-Mediated Transport.Frontiers in cell and developmental biology · 2022
    Review
  11. Article
  12. Review
  13. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 2 countries.

Afnan Azizi *Department of Physiology, Development and Neuroscience, University of Cambridge, Cambridge, United Kingdom.ORCID 0000-0002-3288-9612
Anne Herrmann *Department of Applied Mathematics and Theoretical Physics, Centre for Mathematical Sciences, University of Cambridge, Cambridge, United Kingdom.ORCID 0000-0003-1745-7499
Yinan WanHoward Hughes Medical Institute, Janelia Research Campus, Ashburn, United States.
Salvador Jrp BuseDepartment of Physiology, Development and Neuroscience, University of Cambridge, Cambridge, United Kingdom.
Philipp J KellerHoward Hughes Medical Institute, Janelia Research Campus, Ashburn, United States.ORCID 0000-0003-2896-4920
Raymond E GoldsteinDepartment of Applied Mathematics and Theoretical Physics, Centre for Mathematical Sciences, University of Cambridge, Cambridge, United Kingdom.ORCID 0000-0003-2645-0598
William A HarrisDepartment of Physiology, Development and Neuroscience, University of Cambridge, Cambridge, United Kingdom.ORCID 0000-0002-9995-8096
University of Cambridge · GBHoward Hughes Medical Institute · US

Funding

Engineering and Physical Sciences Research Council EP/M017982/1Wellcome TrustWellcome Trust 100329/Z/12/Z
6 · The paper itself

Abstract

An important question in early neural development is the origin of stochastic nuclear movement between apical and basal surfaces of neuroepithelia during interkinetic nuclear migration. Tracking of nuclear subpopulations has shown evidence of diffusion - mean squared displacements growing linearly in time - and suggested crowding from cell division at the apical surface drives basalward motion. Yet, this hypothesis has not yet been tested, and the forces involved not quantified. We employ long-term, rapid light-sheet and two-photon imaging of early zebrafish retinogenesis to track entire populations of nuclei within the tissue. The time-varying concentration profiles show clear evidence of crowding as nuclei reach close-packing and are quantitatively described by a nonlinear diffusion model. Considerations of nuclear motion constrained inside the enveloping cell membrane show that concentration-dependent stochastic forces inside cells, compatible in magnitude to those found in cytoskeletal transport, can explain the observed magnitude of the diffusion constant.

Indexed as

Cell MovementAnimalsCell NucleusDiffusionEmbryo, NonmammalianRetinaZebrafishdevelopmental biologydiffusioninterkinetic nuclear migrationnuclear crowdingphysics of living systemszebrafish

Identifiers

PMID33021471
PMCPMC7538155
OpenAlexW3091560879

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.