Evidence map›Paper›PMID 33017398›Full record

ArticlePLoS biology2020

Notch dimerization and gene dosage are important for normal heart development, intestinal stem cell maintenance, and splenic marginal zone B-cell homeostasis during mite infestation.

Francis M Kobia, Kristina Preusse, Quanhui Dai, Nicholas Weaver, Matthew R Hass, Praneet Chaturvedi, Sarah J Stein, Warren S Pear, Zhenyu Yuan, Rhett A Kovall and 6 more

Open access · goldAbstract read
In one paragraph

Article in PLoS biology, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
4.7field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 35 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Genome-Wide Analysis IdentifiesFrontiers in cell and developmental biology · 2021
    Article
  10. Biological Significance of NOTCH Signaling Strength.Frontiers in cell and developmental biology · 2021
    Review
  11. eLife · 2020
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

16 authors at 4 institutions in 3 countries.

Francis M KobiaDivision of Developmental Biology, Department of Pediatrics, University of Cincinnati College of Medicine and Cincinnati Children's Hospital Medical Center, Cincinnati, Ohio, United States of America.ORCID 0000-0001-6595-628X
Kristina PreusseDivision of Developmental Biology, Department of Pediatrics, University of Cincinnati College of Medicine and Cincinnati Children's Hospital Medical Center, Cincinnati, Ohio, United States of America.ORCID 0000-0003-3374-4498
Quanhui DaiDivision of Developmental Biology, Department of Pediatrics, University of Cincinnati College of Medicine and Cincinnati Children's Hospital Medical Center, Cincinnati, Ohio, United States of America.
Nicholas WeaverImmunology Graduate Program, University of Cincinnati College of Medicine, Cincinnati, Ohio, United States of America.ORCID 0000-0001-9926-7511
Matthew R HassDivision of Developmental Biology, Department of Pediatrics, University of Cincinnati College of Medicine and Cincinnati Children's Hospital Medical Center, Cincinnati, Ohio, United States of America.
Praneet ChaturvediDivision of Developmental Biology, Department of Pediatrics, University of Cincinnati College of Medicine and Cincinnati Children's Hospital Medical Center, Cincinnati, Ohio, United States of America.ORCID 0000-0002-8713-6570
Sarah J SteinDepartment of Pathology and Laboratory Medicine, Abramson Family Cancer Research Institute, Perelman School of Medicine at the University of Pennsylvania, Philadelphia, Pennsylvania, United States of America.ORCID 0000-0002-1485-0829
Warren S PearDepartment of Pathology and Laboratory Medicine, Abramson Family Cancer Research Institute, Perelman School of Medicine at the University of Pennsylvania, Philadelphia, Pennsylvania, United States of America.ORCID 0000-0002-2624-0526
Zhenyu YuanDepartment of Molecular Genetics, Biochemistry and Microbiology, University of Cincinnati College of Medicine, Cincinnati, Ohio, United States of America.
Rhett A KovallDepartment of Molecular Genetics, Biochemistry and Microbiology, University of Cincinnati College of Medicine, Cincinnati, Ohio, United States of America.ORCID 0000-0003-0520-1613
Yi KuangDivision of Developmental Biology, Department of Pediatrics, University of Cincinnati College of Medicine and Cincinnati Children's Hospital Medical Center, Cincinnati, Ohio, United States of America.ORCID 0000-0002-1509-3620
Natanel EafergenSchool of Neurobiology, Biochemistry, and Biophysics, The George S. Wise Faculty of Life Sciences Tel Aviv University, Tel Aviv, Israel.ORCID 0000-0003-1822-1226
David SprinzakSchool of Neurobiology, Biochemistry, and Biophysics, The George S. Wise Faculty of Life Sciences Tel Aviv University, Tel Aviv, Israel.ORCID 0000-0001-6776-6957
Brian GebeleinDivision of Developmental Biology, Department of Pediatrics, University of Cincinnati College of Medicine and Cincinnati Children's Hospital Medical Center, Cincinnati, Ohio, United States of America.ORCID 0000-0001-9791-9061
Eric W BrunskillDivision of Developmental Biology, Department of Pediatrics, University of Cincinnati College of Medicine and Cincinnati Children's Hospital Medical Center, Cincinnati, Ohio, United States of America.
Raphael KopanDivision of Developmental Biology, Department of Pediatrics, University of Cincinnati College of Medicine and Cincinnati Children's Hospital Medical Center, Cincinnati, Ohio, United States of America.ORCID 0000-0002-0350-2730
Cincinnati Children's Hospital Medical Center · USUniversity of Cincinnati Medical Center · USCancer Research Institute · USTel Aviv University · IL

Funding

IMMUNOBIOLOGY OF NORMAL AND NEOPLASTIC LYMPHOCYTEST32CA009140 · NCI · UNIVERSITY OF PENNSYLVANIA · PI Malay Haldar, WARREN S PEAR · 1985 to 2026
$16.1M
Shared Genomic Segment Analysis and Tumor Subtyping in High-Risk BrCa PedigreesR01CA163353 · NCI · UNIVERSITY OF UTAH · PI CAMP, NICOLA J. · 2012 to 2016
$2.9M
The Mechanism Regulating Renal Progenitor AgingR01DK106225 · NIDDK · CINCINNATI CHILDRENS HOSP MED CTR · PI KOPAN, RAPHAEL · 2016 to 2020
$2.3M
Targeting the Notch:Myc axis in leukemia/lymphomaR01CA215518 · NCI · UNIVERSITY OF PENNSYLVANIA · PI PEAR, WARREN S · 2018 to 2022
$2.3M
SH800 Cell SorterS10OD023410 · OD · CINCINNATI CHILDRENS HOSP MED CTR · PI THORNTON, SHERRY L · 2017 to 2017
$318k
NCI NIH HHS R01 CA163353NCI NIH HHS R01 CA215518NCI NIH HHS T32 CA009140NIDDK NIH HHS R01 DK106225NIH HHS S10 OD023410
6 · The paper itself

Abstract

Cooperative DNA binding is a key feature of transcriptional regulation. Here we examined the role of cooperativity in Notch signaling by CRISPR-mediated engineering of mice in which neither Notch1 nor Notch2 can homo- or heterodimerize, essential for cooperative binding to sequence-paired sites (SPS) located near many Notch-regulated genes. Although most known Notch-dependent phenotypes were unaffected in Notch1/2 dimer-deficient mice, a subset of tissues proved highly sensitive to loss of cooperativity. These phenotypes include heart development, compromised viability in combination with low gene dose, and the gut, developing ulcerative colitis in response to 1% dextran sulfate sodium (DSS). The most striking phenotypes-gender imbalance and splenic marginal zone B-cell lymphoma-emerged in combination with gene dose reduction or when challenged by chronic fur mite infestation. This study highlights the role of the environment in malignancy and colitis and is consistent with Notch-dependent anti-parasite immune responses being compromised in Notch dimer-deficient animals.

Indexed as

Gene DosageHomeostasisAllelesAnimalsBase SequenceB-LymphocytesCell ProliferationChromatinDextran SulfateHeartHeart VentriclesIntestinesMiceMite InfestationsMitesModels, BiologicalChromatinDextran SulfateReceptors, Notch

Identifiers

PMID33017398
PMCPMC7561103
OpenAlexW3091499611

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.