Evidence map›Paper›PMID 33014571›Full record

ArticleBiomedical optics express2020

UNMIX-ME: spectral and lifetime fluorescence unmixing via deep learning.

Jason T Smith, Marien Ochoa, Xavier Intes

Open access · goldAbstract read
In one paragraph

Article in Biomedical optics express, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 25 papers.

0numbers the graph read from it
0cells of the map it votes in
25citing papers in PubMed
2.7field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

25 citing papers in PubMed, 34 citations in OpenAlex.

  1. Article
  2. Article
  3. Photoacoustic Fingerprinting for Robust Molecular Imaging.bioRxiv : the preprint server for biology · 2026
    Article
  4. Article
  5. Review
  6. Article
  7. Live-cell imaging powered by computation.Nature reviews. Molecular cell biology · 2024
    Review
  8. Article
  9. Review
  10. Article
  11. Article
  12. Article
  13. Review
  14. Article
  15. Review
  16. Optica · 2022
    Article
  17. Review
  18. Deep learning in macroscopic diffuse optical imaging.Journal of biomedical optics · 2022
    Review
  19. Deep Learning in Biomedical Optics.Lasers in surgery and medicine · 2021
    Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Jason T SmithDepartment of Biomedical Engineering, Rensselaer Polytechnic Institute, Troy, NY 12180, USA.
Marien OchoaDepartment of Biomedical Engineering, Rensselaer Polytechnic Institute, Troy, NY 12180, USA.
Xavier IntesDepartment of Biomedical Engineering, Rensselaer Polytechnic Institute, Troy, NY 12180, USA.ORCID https://orcid.org/0000-0001-5868-4845
Rensselaer Polytechnic Institute · US

Funding

Role of tumor heterogeneity on receptor engagementR01CA207725 · NCI · RENSSELAER POLYTECHNIC INSTITUTE · PI BARROSO, MARGARIDA, CORR, DAVID THOMAS · 2017 to 2021
$3.0M
Photon-counting X-ray and Optical Tomography for Preclinical Cancer ResearchR01CA237267 · NCI · RENSSELAER POLYTECHNIC INSTITUTE · PI BARROSO, MARGARIDA, INTES, XAVIER · 2019 to 2023
$2.9M
Time-Resolved Wide-Field Molecular Optical TomographyR01EB019443 · NIBIB · RENSSELAER POLYTECHNIC INSTITUTE · PI INTES, XAVIER · 2015 to 2018
$1.7M
NIBIB NIH HHS R01 EB019443
6 · The paper itself

Abstract

Hyperspectral fluorescence lifetime imaging allows for the simultaneous acquisition of spectrally resolved temporal fluorescence emission decays. In turn, the acquired rich multidimensional data set enables simultaneous imaging of multiple fluorescent species for a comprehensive molecular assessment of biotissues. However, to enable quantitative imaging, inherent spectral overlap between the considered fluorescent probes and potential bleed-through must be considered. Such a task is performed via either spectral or lifetime unmixing, typically independently. Herein, we present "UNMIX-ME" (unmix multiple emissions), a deep learning-based fluorescence unmixing routine, capable of quantitative fluorophore unmixing by simultaneously using both spectral and temporal signatures. UNMIX-ME was trained and validated using an

Identifiers

PMID33014571
PMCPMC7510912
OpenAlexW3022753366

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.