Evidence map›Paper›PMID 33013733›Full record

ArticleFrontiers in microbiology2020

Bioorthogonal Non-canonical Amino Acid Tagging Combined With Flow Cytometry for Determination of Activity in Aquatic Microorganisms.

Mathilde Lindivat, Aud Larsen, Ole Kristian Hess-Erga, Gunnar Bratbak, Ingunn Alne Hoell

Open access · goldAbstract read
In one paragraph

Article in Frontiers in microbiology, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
1.9field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 19 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 3 institutions in 1 country.

Mathilde LindivatFaculty of Engineering and Science, Institute of Safety Chemistry and Biomedical Laboratory Sciences, Western Norway University of Applied Sciences, Haugesund, Norway.
Aud LarsenNORCE Environment, NORCE Norwegian Research Centre AS, Bergen, Norway.
Ole Kristian Hess-ErgaNorwegian Institute for Water Research, Bergen, Norway.
Gunnar BratbakDepartment of Biological Sciences, University of Bergen, Bergen, Norway.
Ingunn Alne HoellFaculty of Engineering and Science, Institute of Safety Chemistry and Biomedical Laboratory Sciences, Western Norway University of Applied Sciences, Haugesund, Norway.
University of Bergen · NOWestern Norway University of Applied Sciences · NONorwegian Institute for Water Research · NO

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

In this study, we have combined bioorthogonal non-canonical amino acid tagging (BONCAT) and flow cytometry (FCM) analysis, and we demonstrate the applicability of the method for marine prokaryotes. Enumeration of active marine bacteria was performed by combining the DNA stain SYBR Green with detection of protein production with BONCAT. After optimization of incubation condition and substrate concentration on monoculture of

Indexed as

bioorthogonal non-canonical amino acid taggingflow cytometrymarine microbesprotein synthesissingle cell activity

Identifiers

PMID33013733
PMCPMC7461810
OpenAlexW3058622056

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.