Evidence map›Paper›PMID 33011746›Full record

ArticleCell death & disease2020

Requirement for Serine-384 in Caspase-2 processing and activity.

Alexey V Zamaraev, Pavel I Volik, Dmitry K Nilov, Maria V Turkina, Aleksandra Yu Egorshina, Anna S Gorbunova, Svetlana Iu Iarovenko, Boris Zhivotovsky, Gelina S Kopeina

Erratum issuedOpen access · goldAbstract read
In one paragraph

Article in Cell death & disease, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
0.3field-weighted citation impact, top 42% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 7 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. Review
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

9 authors at 2 institutions in 3 countries.

Alexey V Zamaraev *Faculty of Medicine, MV Lomonosov Moscow State University, Moscow, Russia, 119991.
Pavel I Volik *Faculty of Medicine, MV Lomonosov Moscow State University, Moscow, Russia, 119991.
Dmitry K NilovBelozersky Institute of Physicochemical Biology, MV Lomonosov Moscow State University, Moscow, Russia, 119991.
Maria V TurkinaFaculty of Medicine and Heath Sciences, Department of Clinical and Experimental Medicine, Linköping University, 58185, Linköping, Sweden.
Aleksandra Yu EgorshinaFaculty of Medicine, MV Lomonosov Moscow State University, Moscow, Russia, 119991.ORCID http://orcid.org/0000-0001-7818-1161
Anna S GorbunovaFaculty of Medicine, MV Lomonosov Moscow State University, Moscow, Russia, 119991.
Svetlana Iu IarovenkoFaculty of Medicine, MV Lomonosov Moscow State University, Moscow, Russia, 119991.
Boris ZhivotovskyFaculty of Medicine, MV Lomonosov Moscow State University, Moscow, Russia, 119991.
Gelina S KopeinaFaculty of Medicine, MV Lomonosov Moscow State University, Moscow, Russia, 119991. lirroster@gmail.com.
Lomonosov Moscow State University · RULinköping University · SE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Caspase-2 is a unique and conservative cysteine protease which plays an important role in several cellular processes including apoptotic cell death. Although the molecular mechanisms of its activation remain largely unclear, a major role belongs to the architecture of the caspase-2 active center. We demonstrate that the substitution of the putative phosphorylation site of caspase-2, Serine-384 to Alanine, blocks caspase-2 processing and decreases its enzymatic activity. Strikingly, in silico analysis using molecular dynamics simulations has shown that Serine-384 is crucially involved in interactions within the caspase-2 active center. It stabilizes Arginine-378, which forms a crucial hydrogen bond with the aspartate residue of a substrate. Hence, Serine-384 is essential for supporting a proper architecture of the active center of caspase-2. Moreover, molecular modeling strongly proved steric inaccessibility of Ser-384 to be phosphorylated. Importantly, a multiple alignment has demonstrated that both Serine-384 and Arg-378 residues are highly conservative across all members of caspase family, which allows us to suggest that this diade is indispensable for caspase processing and activity. Spontaneous mutations in this diade might influence oncosuppressive function of caspases, in particular of caspase-2. Likewise, the mutation of Ser-384 is associated with the development of lung squamous cell carcinoma and adenocarcinoma. Taken together, we have uncovered a central feature of the caspase-2 activation mechanism which is crucial for the regulation of its signaling network.

Indexed as

AdenocarcinomaApoptosisBinding SitesCaspase 2Caspase 9Cysteine EndopeptidasesHumansMutation, MissenseSerineCASP2 protein, humanCaspase 2Caspase 9Cysteine EndopeptidasesSerine

Identifiers

PMID33011746
PMCPMC7532978
OpenAlexW3090594996

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.