Evidence map›Paper›PMID 33011211›Full record

ArticleMagnetic resonance imaging2020

Effect of noise and estimator type on bias for analysis of liver proton density fat fraction.

Edward M Lawrence, Nathan T Roberts, Diego Hernando, Lu Mao, Scott B Reeder

Abstract read
In one paragraph

Article in Magnetic resonance imaging, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Edward M LawrenceDepartment of Radiology, University of Wisconsin - Madison, Madison, WI, United States.
Nathan T RobertsDepartment of Radiology, University of Wisconsin - Madison, Madison, WI, United States; Electrical and Computer Engineering, University of Wisconsin - Madison, Madison, WI, United States.
Diego HernandoDepartment of Radiology, University of Wisconsin - Madison, Madison, WI, United States; Medical Physics, University of Wisconsin - Madison, Madison, WI, United States.
Lu MaoBiostatistics and Medical Informatics, University of Wisconsin - Madison, Madison, WI, United States.
Scott B ReederDepartment of Radiology, University of Wisconsin - Madison, Madison, WI, United States; Medical Physics, University of Wisconsin - Madison, Madison, WI, United States; Biomedical Engineering, University of Wisconsin - Madison, Madison, WI, United States; Medicine, University of Wisconsin - Madison, Madison, WI, United States; Emergency Medicine, University of Wisconsin - Madison, Madison, WI, United States. Electronic address: sreeder@wisc.edu.

Funding

Institutional Clinical and Translational Science AwardUL1TR000427 · NCATS · UNIVERSITY OF WISCONSIN-MADISON · PI DREZNER, MARC KENNETH · 2012 to 2016
$32.2M
Technical Validation of MRI Biomarkers of Liver FatR01DK088925 · NIDDK · UNIVERSITY OF WISCONSIN-MADISON · PI REEDER, SCOTT B., SIRLIN, CLAUDE B · 2010 to 2021
$7.1M
Confounder-Corrected Quantitative MRI Biomarkers of HepaticR01DK100651 · NIDDK · UNIVERSITY OF WISCONSIN-MADISON · PI REEDER, SCOTT B. · 2014 to 2017
$2.7M
Evolution of Quantitative MRI Biomarkers of Metabolic Syndrome During PubertyK24DK102595 · NIDDK · UNIVERSITY OF WISCONSIN-MADISON · PI REEDER, SCOTT B. · 2014 to 2018
$927k
NCATS NIH HHS UL1 TR000427NIDDK NIH HHS K24 DK102595NIDDK NIH HHS R01 DK088925NIDDK NIH HHS R01 DK100651
6 · The paper itself

Abstract

purposeProton-density fat-fraction (PDFF) is typically measured from PDFF maps by calculating the mean PDFF value within a region of interest (ROI). However, the mean estimator has been shown to result in bias when signal-to-noise ratio (SNR) is low, resulting from a skewed distribution of PDFF noise statistics. Thus, the purpose of this work was to determine the relative performance of three estimation methods (mean, median, maximum likelihood estimators (MLE)) for analysis of liver PDFF maps.

methodsObservational study of adult patients (n = 56) undergoing abdominal MRI. Both 2D-sequential CSE-MRI ('low-SNR') and 3D CSE-MRI ('high-SNR') acquisitions were obtained. Single-voxel MRS formed the independent reference measurement of hepatic PDFF. Intra-class correlation was tested on a subset of 'low-SNR' acquisitions. ROIs were semi-automatically co-registered across all acquisitions. Bland-Altman analysis and intra-class correlation coefficients were used for statistical analysis. A p-value of <0.05 was considered significant.

resultsFor in vivo low-SNR acquisitions, the mean estimator had a larger error than either the median or MLE values (bias ~ -1% absolute PDFF). The intra-class correlation coefficient was significantly greater for median and maximum likelihood estimators (0.992 and 0.993, respectively) compared to the mean estimator (0.973).

conclusionAlternative ROI analysis strategies, such as MLE or median estimators, are useful to avoid SNR-related PDFF bias. Median may be the most clinically practical strategy given its ease of calculation.

Indexed as

Magnetic Resonance ImagingProtonsSignal-To-Noise RatioAdipose TissueAdultFemaleHumansLiverMaleMiddle AgedProtonsLiver fatMagnetic resonance imagingNoise related biasPDFFProton density fat fractionSteatosis

Identifiers

PMID33011211
PMCPMC8167879

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.