Evidence map›Paper›PMID 33011185›Full record

ArticleJournal of neuroscience methods2021

A user-friendly algorithm for adaptive closed-loop phase-locked stimulation.

Cristian Rodriguez Rivero, Jochen Ditterich

Open access · hybridAbstract read
In one paragraph

Article in Journal of neuroscience methods, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
0.7field-weighted citation impact, top 32% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 9 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 1 institution in 1 country.

Cristian Rodriguez RiveroCenter for Neuroscience, University of California, Davis, United States.
Jochen DitterichCenter for Neuroscience, University of California, Davis, United States; Dept. of Neurobiology, Physiology & Behavior, University of California, Davis, United States. Electronic address: jditterich@ucdavis.edu.
University of California, Davis · US

Funding

Probing the Functional Significance of Neural Oscillations through Closed-Loop Stimulation based on Real-Time Tracking of LFPsR21MH107671 · NIMH · UNIVERSITY OF CALIFORNIA AT DAVIS · PI DITTERICH, JOCHEN · 2016 to 2017
$409k
NIMH NIH HHS R21 MH107671
6 · The paper itself

Abstract

backgroundClosed-loop phase-locked stimulation experiments are rare due to the unavailability of user-friendly algorithms and devices. Our goal is to provide an algorithm for the detection of oscillatory activity in local field potentials (LFPs) and phase prediction, which is user-friendly and robust to non-stationarities in LFPs of behaving animals. NEW

methodWe propose an algorithm that only requires specification of the frequency range within which oscillatory episodes are tracked. Frequency-specific detection thresholds and filter parameters are adjusted automatically based on the short-time LFP power spectrum. Estimates of instantaneous frequency and instantaneous phase are used for phase extrapolation, taking advantage of Bayesian estimation. We used real LFP signals, recorded from a variety of different species and different brain areas, as well as artificial LFP signals with known properties to assess the detection and prediction performance of our algorithm and three previously published reference algorithms under various conditions. RESULTS AND COMPARISON WITH EXISTING

methodsOur algorithm, while significantly more user-friendly than previous approaches, provides a solid detection and prediction performance over a wide range of realistic conditions and, in many cases, has a longer prediction horizon than the reference algorithms. Due to its ability to adjust to changes in the signal, the algorithm is well-prepared to deal with non-stationarities in oscillation frequency, even in the presence of multiple oscillation components.

conclusionsWe have created a universal algorithm for oscillation detection and phase prediction, which performs well and is user-friendly at the same time, making closed-loop phase-locked stimulation experiments easier to accomplish.

Indexed as

AlgorithmsDeep Brain StimulationAnimalsBayes TheoremBrainClosed-loop phase-locked stimulationLocal field potentialOscillation detectionPhase prediction

Identifiers

PMID33011185
PMCPMC7744337
OpenAlexW3090385699

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.