Evidence map›Paper›PMID 33010949›Full record

ReviewTrends in genetics : TIG2021

Mouse Genetic Reference Populations: Cellular Platforms for Integrative Systems Genetics.

Emily Swanzey, Callan O'Connor, Laura G Reinholdt

Abstract readReview
In one paragraph

Review in Trends in genetics : TIG, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 25 papers.

0numbers the graph read from it
0cells of the map it votes in
25citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

25 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Review
  10. Review
  11. Article
  12. Review
  13. Article
  14. Review
  15. Article
  16. Article
  17. Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Emily SwanzeyThe Jackson Laboratory, Bar Harbor, ME, USA.
Callan O'ConnorThe Jackson Laboratory, Bar Harbor, ME, USA; Tufts Graduate School of Biomedical Sciences, Boston, MA, USA.
Laura G ReinholdtThe Jackson Laboratory, Bar Harbor, ME, USA. Electronic address: laura.reinholdt@jax.org.

Funding

Use for ResourceP40OD011102 · OD · JACKSON LABORATORY · PI Steven Carmen Munger, Stephen A Murray · 2012 to 2026
$15.0M
Genetic Factors that Influence Arsenic ToxicityR01ES029916 · NIEHS · JACKSON LABORATORY · PI CHURCHILL, GARY A, KORSTANJE, RONNY · 2019 to 2023
$3.6M
Genetically Diverse Mouse Embryonic Stem Cells: A Platform for Cellular Systems GeneticsR24OD030037 · OD · JACKSON LABORATORY · PI BAKER, CHRISTOPHER LEE, MUNGER, STEVEN CARMEN · 2021 to 2024
$3.2M
NIEHS NIH HHS R01 ES029916NIH HHS P40 OD011102NIH HHS R24 OD030037
6 · The paper itself

Abstract

Interrogation of disease-relevant cellular and molecular traits exhibited by genetically diverse cell populations enables in vitro systems genetics approaches for uncovering the basic properties of cellular function and identity. Primary cells, stem cells, and organoids derived from genetically diverse mouse strains, such as Collaborative Cross and Diversity Outbred populations, offer the opportunity for parallel in vitro/in vivo screening. These panels provide genetic resolution for variant discovery and functional characterization, as well as disease modeling and in vivo validation capabilities. Here we review mouse cellular systems genetics approaches for characterizing the influence of genetic variation on signaling networks and phenotypic diversity, and we discuss approaches for data integration and cross-species validation.

Indexed as

AnimalsGene Regulatory NetworksGeneticsGenetic VariationGenomicsGenotypeMiceQuantitative Trait LociSignal TransductionSystems Biologycollaborative crossdiversity outbredgenetic reference populationintegrative genomicsquantitative trait locussystems genetics

Identifiers

PMID33010949
PMCPMC7889615

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.