Evidence map›Paper›PMID 33010688›Full record

ArticleDNA repair2020

Alteration of genetic recombination and double-strand break repair in human cells by progerin expression.

Celina J Komari, Anne O Guttman, Shelby R Carr, Taylor L Trachtenberg, Elise A Orloff, Ashley V Haas, Andrew R Patrick, Sona Chowdhary, Barbara C Waldman, Alan S Waldman

Open access · greenAbstract read
In one paragraph

Article in DNA repair, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
0.9field-weighted citation impact, top 26% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 18 citations in OpenAlex.

  1. Mechanisms for assembly of the nucleoplasmic reticulum.Cellular and molecular life sciences : CMLS · 2024
    Review
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  11. Review
  12. The impact of alterations in lamin A on genome integrity.Mutation research. Reviews in mutation research
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 1 institution in 1 country.

Celina J KomariDepartment of Public Health, University of South Carolina, Columbia, SC 29208, USA.
Anne O GuttmanDepartment of Exercise Science, University of South Carolina, Columbia, SC 29208, USA.
Shelby R CarrDepartment of Exercise Science, University of South Carolina, Columbia, SC 29208, USA.
Taylor L TrachtenbergDepartment of Exercise Science, University of South Carolina, Columbia, SC 29208, USA.
Elise A OrloffDepartment of Exercise Science, University of South Carolina, Columbia, SC 29208, USA.
Ashley V HaasDepartment of Biological Sciences, University of South Carolina, Columbia, SC 29208, USA.
Andrew R PatrickDepartment of Biological Sciences, University of South Carolina, Columbia, SC 29208, USA.
Sona ChowdharyDepartment of Biological Sciences, University of South Carolina, Columbia, SC 29208, USA.
Barbara C WaldmanDepartment of Biological Sciences, University of South Carolina, Columbia, SC 29208, USA.
Alan S WaldmanDepartment of Biological Sciences, University of South Carolina, Columbia, SC 29208, USA. Electronic address: awaldman@biol.sc.edu.
University of South Carolina · US

Funding

Lamin A and the Fidelity of DNA Double-Strand Break RepairR03AG064525 · NIA · UNIVERSITY OF SOUTH CAROLINA AT COLUMBIA · PI WALDMAN, ALAN S. · 2020 to 2021
$149k
NIA NIH HHS R03 AG064525
6 · The paper itself

Abstract

Hutchinson-Gilford Progeria Syndrome (HGPS) is a rare autosomal, dominant genetic condition characterized by many features of accelerated aging. On average, children with HGPS live to about fourteen years of age. The syndrome is commonly caused by a point mutation in the LMNA gene which normally codes for lamin A and its splice variant lamin C, components of the nuclear lamina. The LMNA mutation alters splicing, leading to production of a truncated, farnesylated form of lamin A referred to as "progerin." Progerin is also expressed at very low levels in healthy individuals and appears to play a role in normal aging. HGPS is associated with an accumulation of genomic DNA double-strand breaks (DSBs), suggesting corruption of DNA repair. In this work, we investigated the influence of progerin expression on DSB repair in the human genome at the nucleotide level. We used a model system that involves a reporter DNA substrate inserted in the genome of cultured human cells. A DSB could be induced within the substrate through exogenous expression of endonuclease I-SceI, and DSB repair events occurring via either homologous recombination (HR) or nonhomologous end-joining (NHEJ) were recoverable. Additionally, spontaneous HR events were recoverable in the absence of artificial DSB induction. We compared DSB repair and spontaneous HR in cells overexpressing progerin versus cells expressing no progerin. We report that overexpression of progerin correlated with an increase in DSB repair via NHEJ relative to HR, as well as an increased fraction of HR events occurring via gene conversion. Progerin also engendered an apparent increase in spontaneous HR events, with a highly significant shift toward gene conversion events, and an increase in DNA amplification events. Such influences of progerin on DNA transactions may impact genome stability and contribute to aging.

Indexed as

DNA Breaks, Double-StrandedDNA End-Joining RepairMutationRecombinational DNA RepairCells, CulturedDNAHumansLamin Type AProgeriaDNALamin Type Aprelamin ADouble-strand break repairGenomic instabilityHomologous recombinationNonhomologous end-joiningProgerin

Identifiers

PMID33010688
PMCPMC7669652
OpenAlexW3089857558

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.