Evidence map›Paper›PMID 33008837›Full record

ArticleRNA (New York, N.Y.)2021

Structural diversity and phylogenetic distribution of valyl tRNA-like structures in viruses.

Madeline E Sherlock, Erik W Hartwick, Andrea MacFadden, Jeffrey S Kieft

Open access · bronzeAbstract read
In one paragraph

Article in RNA (New York, N.Y.), 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
2.8field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 18 citations in OpenAlex.

  1. Article
  2. Structural basis of MALAT1 RNA maturation and mascRNA biogenesis.Nature structural & molecular biology · 2024
    Article
  3. Review
  4. Article
  5. Review
  6. RNA-Based Control of Fungal Pathogens in Plants.International journal of molecular sciences · 2023
    Review
  7. Article
  8. Review
  9. Getting to the bottom of lncRNA mechanism: structure-function relationships.Mammalian genome : official journal of the International Mammalian Genome Society · 2022
    Review
  10. Review
  11. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Madeline E SherlockDepartment of Biochemistry and Molecular Genetics, University of Colorado Denver School of Medicine, Aurora, Colorado 80045, USA.ORCID 0000-0002-6471-4243
Erik W HartwickDepartment of Biochemistry and Molecular Genetics, University of Colorado Denver School of Medicine, Aurora, Colorado 80045, USA.ORCID 0000-0001-9276-8567
Andrea MacFaddenDepartment of Biochemistry and Molecular Genetics, University of Colorado Denver School of Medicine, Aurora, Colorado 80045, USA.
Jeffrey S KieftDepartment of Biochemistry and Molecular Genetics, University of Colorado Denver School of Medicine, Aurora, Colorado 80045, USA.ORCID 0000-0002-3718-1891
University of Colorado Denver · US

Funding

Structure, function, and dynamics of viral RNAs and RNA-containing complexesR35GM118070 · NIGMS · UNIVERSITY OF COLORADO DENVER · PI Jeffrey S Kieft · 2016 to 2026
$10.6M
NIGMS NIH HHS R35 GM118070
6 · The paper itself

Abstract

Viruses commonly use specifically folded RNA elements that interact with both host and viral proteins to perform functions important for diverse viral processes. Examples are found at the 3' termini of certain positive-sense ssRNA virus genomes where they partially mimic tRNAs, including being aminoacylated by host cell enzymes. Valine-accepting tRNA-like structures (TLS

Indexed as

Genetic VariationPhylogenyAnticodonBase SequenceBinding SitesComputational BiologyInsect VirusesModels, MolecularMolecular MimicryPlant VirusesRNA FoldingRNA, Transfer, ValRNA, ViralSequence Homology, Nucleic AcidValineAnticodonRNA, Transfer, ValRNA, ViralValineaminoacylationRNA structuretRNA mimicryviral RNA

Identifiers

PMID33008837
PMCPMC7749636
OpenAlexW3091392827

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.