Evidence map›Paper›PMID 33007085›Full record

ArticleThe Journal of cell biology2020

Quality control of 40S ribosome head assembly ensures scanning competence.

Haina Huang, Homa Ghalei, Katrin Karbstein

Open access · bronzeAbstract read
In one paragraph

Article in The Journal of cell biology, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 23 papers.

0numbers the graph read from it
0cells of the map it votes in
23citing papers in PubMed
1.9field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

23 citing papers in PubMed, 36 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Article
  5. Article
  6. Review
  7. Ribosome Assembly and Repair.Annual review of cell and developmental biology · 2024
    Review
  8. Article
  9. Article
  10. Article
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  12. Article
  13. Review
  14. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Haina HuangDepartment of Integrative Structural and Computational Biology, The Scripps Research Institute, Jupiter, FL.
Homa GhaleiDepartment of Integrative Structural and Computational Biology, The Scripps Research Institute, Jupiter, FL.
Katrin KarbsteinDepartment of Integrative Structural and Computational Biology, The Scripps Research Institute, Jupiter, FL.
Scripps Research Institute · US

Funding

Dissecting the Mechanisms of Regulation and Quality Control in Ribosome Assembly and the Consequences of their FailureR35GM136323 · NIGMS · VANDERBILT UNIVERSITY · PI Katrin Karbstein · 2020 to 2026
$6.1M
Quality Control in Ribosome Assembly - the Function of Regulatory ProteinsR01GM086451 · NIGMS · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI KARBSTEIN, KATRIN · 2009 to 2019
$4.8M
Kinase-mediated assembly of the mRNA entry channel in 40S ribosomesR01GM117093 · NIGMS · SCRIPPS FLORIDA · PI KARBSTEIN, KATRIN · 2016 to 2019
$1.7M
Howard Hughes Medical Institute 55108536NIGMS NIH HHS R01 GM086451NIGMS NIH HHS R01 GM117093NIGMS NIH HHS R35 GM136323
6 · The paper itself

Abstract

During translation initiation, 40S ribosomes scan the mRNA until they encounter the start codon, where conformational changes produce a translation-competent 80S complex. Destabilizing the scanning complex results in misinitiation at non-AUG codons, demonstrating its importance for fidelity. Here, we use a combination of biochemical and genetic analyses to demonstrate that the ability of the nascent subunit to adopt the scanning complex is tested during assembly via structural mimicry. Specifically, formation of the 80S-like assembly intermediate, which structurally resembles scanning complexes, requires the correct folding of two rRNA elements in the subunit head and the proper positioning of the universally conserved head proteins Rps3, Rps15, Rps20, and Rps29. rRNA misfolding impairs the formation of 80S-like ribosomes, and bypass of individual checkpoints using cancer-associated mutations produces ribosomes defective in accurate start-site selection. Thus, the formation of 80S-like assembly intermediates is a quality control step that ensures scanning competence of the nascent subunit.

Indexed as

Protein BiosynthesisQuality ControlRibosomal ProteinsRibosomesRNA, RibosomalSaccharomyces cerevisiaeSaccharomyces cerevisiae ProteinsRibosomal ProteinsRNA, RibosomalSaccharomyces cerevisiae Proteins

Identifiers

PMID33007085
PMCPMC7534925
OpenAlexW3090092177

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-SA
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.