Evidence map›Paper›PMID 33006666›Full record

ArticleMolecular genetics and genomics : MGG2021

Genome-wide association mapping for protein, oil and water-soluble protein contents in soybean.

Shanshan Zhang, Derong Hao, Shuyu Zhang, Dan Zhang, Hui Wang, Haiping Du, Guizhen Kan, Deyue Yu

Abstract read
PubMed Publisher
In one paragraph

Article in Molecular genetics and genomics : MGG, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
6.3field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed, 42 citations in OpenAlex.

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  8. Genetic mapping and functional genomics of soybean seed protein.Molecular breeding : new strategies in plant improvement · 2023
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 4 institutions in 1 country.

Shanshan ZhangNational Key Laboratory of Crop Genetics and Germplasm Enhancement, National Center for Soybean Improvement, Jiangsu Collaborative Innovation Center for Modern Crop Production, Nanjing Agricultural University, Nanjing, 210095, China.
Derong HaoJiangsu Yanjiang Institute of Agricultural Sciences, Nantong, 226000, China.
Shuyu ZhangNational Key Laboratory of Crop Genetics and Germplasm Enhancement, National Center for Soybean Improvement, Jiangsu Collaborative Innovation Center for Modern Crop Production, Nanjing Agricultural University, Nanjing, 210095, China.
Dan ZhangCollaborative Innovation Center of Henan Grain Crops, College of Agronomy, Henan Agricultural University, Zhengzhou, 450000, China.
Hui WangNational Key Laboratory of Crop Genetics and Germplasm Enhancement, National Center for Soybean Improvement, Jiangsu Collaborative Innovation Center for Modern Crop Production, Nanjing Agricultural University, Nanjing, 210095, China.
Haiping DuSchool of Life Sciences, Guangzhou University, Guangzhou, 510006, China.
Guizhen KanNational Key Laboratory of Crop Genetics and Germplasm Enhancement, National Center for Soybean Improvement, Jiangsu Collaborative Innovation Center for Modern Crop Production, Nanjing Agricultural University, Nanjing, 210095, China. kanguizhen@njau.edu.cn.
Deyue YuNational Key Laboratory of Crop Genetics and Germplasm Enhancement, National Center for Soybean Improvement, Jiangsu Collaborative Innovation Center for Modern Crop Production, Nanjing Agricultural University, Nanjing, 210095, China. dyyu@njau.edu.cn.ORCID http://orcid.org/0000-0001-7263-2750
Nanjing Agricultural University · CNGuangzhou University · CNHenan Agricultural University · CNJiangsu Academy of Agricultural Sciences · CN

Funding

Fundamental Research Funds for the Central Universities KYZ201705Ministry of Agriculture of the People's Republic of China 2016ZX08004-003Ministry of Agriculture of the People's Republic of China 2016ZX08009003-004Ministry of Science and Technology of the People's Republic of China 2017YFE0111000National Natural Science Foundation of China 31571688National Natural Science Foundation of China 31671715National Natural Science Foundation of China 31871649
6 · The paper itself

Abstract

As a globally important legume crop, soybean provides excellent sources of protein and oil for human and livestock nutrition. Improving seed protein and oil contents has always been an important objective in soybean breeding. Water-soluble protein plays a significant role in the processing and efficacy of soybean protein. Here, a genome-wide association study (GWAS) of seed compositions (protein, oil, and water-soluble protein contents) was conducted using 211 diverse soybean accessions genotyped with a 355 K SoySNP array. Three, four, and five QTLs were identified related to the protein, oil, and water-soluble protein contents, respectively. Furthermore, five QTLs (qPC-15-1, qOC-8-1, qOC-12-1, qOC-20-1 and qWSPC-8-1) were detected in multiple environments. Analysis of the favorable alleles for oil and water-soluble protein contents showed that qOC-8-1 (qWSPC-8-1) exerted inverse effects on oil and water-soluble protein synthesis. Relative expression analysis suggested that Glyma.15G049200 in qPC-15-1 affects protein synthesis and Glyma.08G107800 in qOC-8-1 and qWSPC-8-1 might be involved in oil and water-soluble protein synthesis, producing opposite effects. The candidate genes and significant SNPs detected in the present study will allow a deeper understanding of the genetic basis for the regulation of protein, oil and water-soluble protein contents and provide important information that could be utilized in marker-assisted selection for soybean quality improvement.

Indexed as

Genetic LinkageGenome, PlantQuantitative Trait LociAllelesChromosome MappingGenome-Wide Association StudyGenotypeGlycine maxPhenotypePlant BreedingPlant OilsPlant ProteinsPolymorphism, Single NucleotideSeedsSolubilityPlant OilsPlant ProteinsGenome-wide associationOilProteinSoybeanWater-soluble protein

Identifiers

PMID33006666
OpenAlexW3090596042

What OpenQuestion holds

Textmetadata
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.