Evidence map›Paper›PMID 33005707›Full record

ArticleData in brief2020

Proteomics data of SNF1-related protein kinase 2.4 interacting proteins revealed by immunoprecipitation-mass spectrometry.

Tong Zhang, Jacqueline D Schneider, Chuwei Lin, Jin Koh, Sixue Chen

Abstract read
In one paragraph

Article in Data in brief, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Proteomics of Homeobox7 Enhanced Salt Tolerance inInternational journal of molecular sciences · 2021
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Tong ZhangDepartment of Biology, University of Florida, Gainesville, FL 32610, USA.
Jacqueline D SchneiderDepartment of Biology, University of Florida, Gainesville, FL 32610, USA.
Chuwei LinDepartment of Biology, University of Florida, Gainesville, FL 32610, USA.
Jin KohInterdisciplinary Center for Biotechnology Research, University of Florida, Gainesville, FL 32610, USA.
Sixue ChenDepartment of Biology, University of Florida, Gainesville, FL 32610, USA.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Identification of kinase substrates is a prerequisite for elucidating the mechanism by which a kinase transduces internal or external stimuli to cellular responses. Conventional methods to profile this type of protein-protein interaction typically deal with one kinase-substrate pair at a time. Mass spectrometry-based proteomics, on the other hand, can determine putative kinase-substrate pairs at a large-scale in an unbiased manner. In this study, we identified the interacting partners of SNF1-related protein kinase 2.4 (SnRK2.4) via immunoprecipitation coupled with mass spectrometry. Proteins from stable transgenic Arabidopsis plants overexpressing a FLAG-tagged SnRK2.4 (cloned from

Indexed as

Immunoprecipitation-mass spectrometryProtein-protein interactionProteomicsSNF1-related protein kinase 2.4

Identifiers

PMID33005707
PMCPMC7519261

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.