Evidence map›Paper›PMID 33005194›Full record

ArticleInternational journal of microbiology2020

Urinary Calculi: A Microbiological and Biochemical Analysis at a Tertiary Care Hospital in Eastern Nepal.

Pratima Shah, Ratna Baral, C S Agrawal, Madhab Lamsal, Dharanidhar Baral, Basudha Khanal

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Article in International journal of microbiology, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
0.9field-weighted citation impact, top 22% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 14 citations in OpenAlex.

  1. Article
  2. Review
  3. Observational
  4. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 1 institution in 1 country.

Pratima ShahDepartment of Microbiology & Infectious Diseases, B.P. Koirala Institute of Health Sciences (BPKIHS), Dharan, Sunsari 56700, Nepal.ORCID https://orcid.org/0000-0001-6351-9545
Ratna BaralDepartment of Microbiology & Infectious Diseases, B.P. Koirala Institute of Health Sciences (BPKIHS), Dharan, Sunsari 56700, Nepal.
C S AgrawalDepartment of Surgery, B.P. Koirala Institute of Health Sciences (BPKIHS), Dharan, Sunsari 56700, Nepal.
Madhab LamsalDepartment of Biochemistry, B.P. Koirala Institute of Health Sciences (BPKIHS), Dharan, Sunsari 56700, Nepal.
Dharanidhar BaralSchool of Public health and Community Medicine, B.P. Koirala Institute of Health Sciences (BPKIHS), Dharan, Sunsari 56700, Nepal.
Basudha KhanalDepartment of Microbiology & Infectious Diseases, B.P. Koirala Institute of Health Sciences (BPKIHS), Dharan, Sunsari 56700, Nepal.
B.P. Koirala Institute of Health Sciences · NP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundThe occurrence of urinary tract infection in presence of urolithiasis is frequently noted; however, microbial agents of urolithiasis and their antimicrobial susceptibility patterns remain underinvestigated. This study aimed to identify the microorganisms isolated from urine and stone matrices to determine their antimicrobial susceptibility, to find the association between the pathogens of urine and stone matrices, and to perform the biochemical analysis of stones.

methodsA total of 88 cases of urolithiasis admitted for elective stone removal at Department of surgery, B.P. Koirala Institute of Health Sciences (BPKIHS), were enrolled. Preoperative urine culture and postoperative stone culture were performed. Isolation, identification, and AST were done by the standard microbiological technique. Further qualitative biochemical analysis of stones was also attempted.

resultAmong 88 stone formers recruited, culture of urine, whole stone, and nidus yielded the growth of bacteria 44, 32, and 30, respectively. Bacteria isolated from urine culture correlated with those from stone matrices with a sensitivity of 90%, specificity of 79.69%, PPV of 63.64%, and NPV of 95.45%.

conclusionsThe association of microorganism isolated from urine and nidus culture was significant that can predict the source of infective stone; however, in some cases, microorganisms and the antimicrobial susceptibility pattern from urine and nidus were different. This study emphasizes the use of appropriate antimicrobial agents to prevent the regrowth of residual stones and minimize the risk of infectious complications after surgical removal of stones.

Identifiers

PMID33005194
PMCPMC7503111
OpenAlexW3085921371

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.