Evidence map›Paper›PMID 33004973›Full record

ArticleScientific reports2020

Mid-infrared spectroscopic screening of metabolic alterations in stress-exposed gilthead seabream (Sparus aurata).

Cláudia Raposo de Magalhães, Raquel Carrilho, Denise Schrama, Marco Cerqueira, Ana M Rosa da Costa, Pedro M Rodrigues

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
2.7field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 17 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 1 institution in 1 country.

Cláudia Raposo de Magalhães *Centre of Marine Sciences, CCMAR, Universidade Do Algarve, Campus de Gambelas, Edifício 7, 8005-139, Faro, Portugal.
Raquel Carrilho *Centre of Marine Sciences, CCMAR, Universidade Do Algarve, Campus de Gambelas, Edifício 7, 8005-139, Faro, Portugal.
Denise SchramaCentre of Marine Sciences, CCMAR, Universidade Do Algarve, Campus de Gambelas, Edifício 7, 8005-139, Faro, Portugal.
Marco CerqueiraCentre of Marine Sciences, CCMAR, Universidade Do Algarve, Campus de Gambelas, Edifício 7, 8005-139, Faro, Portugal.
Ana M Rosa da CostaAlgarve Chemistry Research Centre, CIQA, Universidade Do Algarve, Campus de Gambelas, Edifício 2, 8005-139, Faro, Portugal.
Pedro M RodriguesCentre of Marine Sciences, CCMAR, Universidade Do Algarve, Campus de Gambelas, Edifício 7, 8005-139, Faro, Portugal. pmrodrig@ualg.pt.
University of Algarve · PT

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Stress triggers a battery of physiological responses in fish, including the activation of metabolic pathways involved in energy production, which helps the animal to cope with the adverse situation. Prolonged exposure to stressful farming conditions may induce adverse effects at the whole-animal level, impairing welfare. Fourier transform infrared (FTIR) spectroscopy is a rapid biochemical fingerprinting technique, that, combined with chemometrics, was applied to disclose the metabolic alterations in the fish liver as a result of exposure to standard stressful practices in aquaculture. Gilthead seabream (Sparus aurata) adults exposed to different stressors were used as model species. Spectra were preprocessed before multivariate statistical analysis. Principal components analysis (PCA) was used for pattern recognition and identification of the most discriminatory wavenumbers. Key spectral features were selected and used for classification using the k-nearest neighbour (KNN) algorithm to evaluate whether the spectral changes allowed for the reliable discrimination between experimental groups. PCA loadings suggested that major variations in the hepatic infrared spectra responsible for the discrimination between the experimental groups were due to differences in the intensity of absorption bands associated with proteins, lipids and carbohydrates. This broad-range technique can thus be useful in an exploratory approach before any targeted analysis.

Indexed as

AquacultureAnimalsHousing, AnimalHypoxiaLiverSea BreamSpectroscopy, Fourier Transform InfraredStress, Physiological

Identifiers

PMID33004973
PMCPMC7529800
OpenAlexW3091193927

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.