Evidence map›Paper›PMID 33002629›Full record

ReviewBiochimica et biophysica acta. Proteins and proteomics2021

Advancing d-amino acid-containing peptide discovery in the metazoan.

David H Mast, James W Checco, Jonathan V Sweedler

Open access · greenAbstract readReview
In one paragraph

Review in Biochimica et biophysica acta. Proteins and proteomics, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 19 papers.

0numbers the graph read from it
0cells of the map it votes in
19citing papers in PubMed
1.7field-weighted citation impact, top 17% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

19 citing papers in PubMed, 33 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Mammalian Tolerance to Amino Acid Heterochirality.Chembiochem : a European journal of chemical biology · 2025
    Review
  5. Article
  6. Review
  7. A novel series of metazoan L/D peptide isomerases.The Journal of biological chemistry · 2024
    Article
  8. Article
  9. Article
  10. Occurrence of D-amino acids in natural products.Natural products and bioprospecting · 2023
    Review
  11. Article
  12. Peptidomics.Nature reviews. Methods primers · 2023
    Article
  13. Endogenous l- to d-amino acid residue isomerization modulates selectivity between distinct neuropeptide receptor family members.Proceedings of the National Academy of Sciences of the United States of America · 2023
    Article
  14. Article
  15. Review
  16. Article
  17. Review
  18. Article
  19. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 2 institutions in 1 country.

David H MastDepartment of Chemistry and the Beckman Institute for Advanced Science and Technology, University of Illinois at Urbana-Champaign, Urbana, IL 61801, United States.
James W CheccoDepartment of Chemistry, University of Nebraska-Lincoln, Lincoln, NE 68588, United States. Electronic address: checco@unl.edu.
Jonathan V SweedlerDepartment of Chemistry and the Beckman Institute for Advanced Science and Technology, University of Illinois at Urbana-Champaign, Urbana, IL 61801, United States. Electronic address: jsweedle@illinois.edu.
University of Illinois Urbana-Champaign · USUniversity of Nebraska–Lincoln · US

Funding

The UIUC Neuroproteomics Center on Cell-Cell SignalingP30DA018310 · NIDA · UNIVERSITY OF ILLINOIS URBANA-CHAMPAIGN · PI Jonathan V. Sweedler · 2004 to 2026
$24.9M
SUBCELLULAR CHARACTERIZATION OF NEUROTRANSMITTERSR01NS031609 · NINDS · UNIVERSITY OF ILLINOIS URBANA-CHAMPAIGN · PI SWEEDLER, JONATHAN V. · 1998 to 2022
$6.2M
NIDA NIH HHS P30 DA018310NINDS NIH HHS R01 NS031609
6 · The paper itself

Abstract

The discovery of enzyme-derived d-amino acid-containing peptides (DAACPs) that have physiological importance in the metazoan challenges previous assumptions about the homochirality of animal proteins while simultaneously revealing new analytical challenges in the structural and functional characterization of peptides. Most known DAACPs have been identified though laborious activity-guided purification studies or by homology to previously identified DAACPs. Peptide characterization experiments are increasingly dominated by high throughput mass spectrometry-based peptidomics, with stereochemistry rarely considered due to the technical challenges of identifying l/d isomerization. This review discusses the prevalence of enzyme-derived DAACPs among animals and the physiological consequences of peptide isomerization. Also highlighted are the analytical methods that have been applied for structural characterization/discovery of DAACPs, including results of several recent studies using non-targeted discovery methods for revealing novel DAACPs, strongly suggesting that more DAACPs remain to be uncovered.

Indexed as

Amino AcidsAmphibiansAnimalsAntimicrobial Cationic PeptidesArthropodsConotoxinsMammalsMolluscaOligopeptidesOpioid PeptidesPeptides, CyclicPhylogenyStereoisomerismAmino AcidsAntimicrobial Cationic PeptidesConotoxinsOligopeptidesOpioid PeptidesPeptides, CyclicD-amino acidsHormonesNeuropeptidesPeptide isomerizationPost-translational modifications

Identifiers

PMID33002629
PMCPMC7736501
OpenAlexW3089481098

What OpenQuestion holds

Textmetadata
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.