Evidence map›Paper›PMID 33002105›Full record

ArticleCardiovascular research2021

Transcriptome analysis of non human primate-induced pluripotent stem cell-derived cardiomyocytes in 2D monolayer culture vs. 3D engineered heart tissue.

Huaxiao Yang, Ningyi Shao, Alexandra Holmström, Xin Zhao, Tony Chour, Haodong Chen, Ilanit Itzhaki, Haodi Wu, Mohamed Ameen, Nathan J Cunningham and 5 more

Open access · bronzeAbstract readComparative StudyVideo-Audio Media
In one paragraph

Article in Cardiovascular research, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 23 papers.

0numbers the graph read from it
0cells of the map it votes in
23citing papers in PubMed
1.2field-weighted citation impact, top 22% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

23 citing papers in PubMed, 27 citations in OpenAlex.

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  8. Research Progress on Neural Cell Culture Systems.Current neuropharmacology · 2025
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4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

15 authors at 3 institutions in 1 country.

Huaxiao YangStanford Cardiovascular Institute, 265 Campus Drive G1120B, Stanford, CA 94305-5454, USA.ORCID 0000-0001-9335-8201
Ningyi ShaoStanford Cardiovascular Institute, 265 Campus Drive G1120B, Stanford, CA 94305-5454, USA.ORCID 0000-0003-4231-828X
Alexandra HolmströmStanford Cardiovascular Institute, 265 Campus Drive G1120B, Stanford, CA 94305-5454, USA.
Xin ZhaoStanford Cardiovascular Institute, 265 Campus Drive G1120B, Stanford, CA 94305-5454, USA.ORCID 0000-0001-5360-7146
Tony ChourStanford Cardiovascular Institute, 265 Campus Drive G1120B, Stanford, CA 94305-5454, USA.ORCID 0000-0003-3273-5549
Haodong ChenStanford Cardiovascular Institute, 265 Campus Drive G1120B, Stanford, CA 94305-5454, USA.ORCID 0000-0003-2798-0478
Ilanit ItzhakiStanford Cardiovascular Institute, 265 Campus Drive G1120B, Stanford, CA 94305-5454, USA.
Haodi WuStanford Cardiovascular Institute, 265 Campus Drive G1120B, Stanford, CA 94305-5454, USA.
Mohamed AmeenStanford Cardiovascular Institute, 265 Campus Drive G1120B, Stanford, CA 94305-5454, USA.
Nathan J CunninghamStanford Cardiovascular Institute, 265 Campus Drive G1120B, Stanford, CA 94305-5454, USA.ORCID 0000-0001-5854-8747
Chengyi TuStanford Cardiovascular Institute, 265 Campus Drive G1120B, Stanford, CA 94305-5454, USA.
Ming-Tao ZhaoStanford Cardiovascular Institute, 265 Campus Drive G1120B, Stanford, CA 94305-5454, USA.
Alice F TarantalDepartment of Pediatrics, School of Medicine, One Shields Avenue, Davis, CA 95616-8542, USA.
Oscar J AbilezStanford Cardiovascular Institute, 265 Campus Drive G1120B, Stanford, CA 94305-5454, USA.ORCID 0000-0002-9991-400X
Joseph C WuStanford Cardiovascular Institute, 265 Campus Drive G1120B, Stanford, CA 94305-5454, USA.ORCID 0000-0002-6068-8041
Cardiovascular Institute of the South · USUniversity of California, Davis · USUniversity of North Texas · US

Funding

National Institute on Aging (NIA) ColonyP51OD011107 · OD · UNIVERSITY OF CALIFORNIA AT DAVIS · PI Simon J. Atkinson · 2012 to 2026
$191.5M
Training In Cardiovascular Physiology & PharmacologyT32HL007444 · NHLBI · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI Ju Chen, Robert Scott Ross · 1985 to 2026
$11.1M
Center for Fetal Monkey Gene Transfer for Heart, Lung, and Blood DiseasesR24HL085794 · NHLBI · UNIVERSITY OF CALIFORNIA AT DAVIS · PI TARANTAL, ALICE F · 2006 to 2016
$9.7M
Human iPSCs for Elucidating Intercellular Crosstalk Signaling in Dilated CardiomyopathyR01HL141371 · NHLBI · STANFORD UNIVERSITY · PI WONG, WING H., WU, JOSEPH C. · 2018 to 2025
$6.2M
Modeling Tyrosine Kinase Inhibitor-Induced Vascular Dysfunction Using Human iPSCsR01HL141851 · NHLBI · STANFORD UNIVERSITY · PI WONG, WING H., WU, JOSEPH C. · 2018 to 2025
$5.7M
Single Cell Sequencing of Human iPSC-CM Subtype Identity and FunctionR01HL145676 · NHLBI · STANFORD UNIVERSITY · PI MARK MERCOLA, Joseph C. Wu · 2019 to 2026
$5.1M
UCSD PRIDE Faculty Development Program in Cardiovascular SciencesR25HL145817 · NHLBI · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI Robert Scott Ross, Joann Trejo · 2019 to 2026
$3.3M
Effect of Microgravity on Drug Responses Using Engineered Heart TissuesUG3TR002588 · NCATS · STANFORD UNIVERSITY · PI PRUITT, BETH L, WU, JOSEPH C. · 2018 to 2019
$1.5M
Optogenetic Engineered Heart Muscle for Disease ModelingK01HL130608 · NHLBI · STANFORD UNIVERSITY · PI ABILEZ, OSCAR JOHN · 2016 to 2020
$862k
Replacement of Small Animal Echocardiographic InstrumentationS10OD010417 · OD · VETERANS MEDICAL RESEARCH FDN/SAN DIEGO · PI ROSS, ROBERT SCOTT · 2012 to 2012
$371k
HUMAN AGING AND FACE MEMORYR01AG007798 · NIA · UNIVERSITY OF TEXAS DALLAS · PI BARTLETT, JAMES C · 1988 to 1990
–
American Heart AssociationCalifornia Institute of Regenerative Medicine RT3-07798California National Primate Research CenterNCATS NIH HHS UG3 TR002588NHLBI NIH HHS K01 HL130608NHLBI NIH HHS L30 HL138771NHLBI NIH HHS R01 HL141371NHLBI NIH HHS R01 HL141851NHLBI NIH HHS R01 HL145676NHLBI NIH HHS R24 HL085794NHLBI NIH HHS R25 HL145817NHLBI NIH HHS T32 HL007444NIH HHS P51 OD011107NIH HHS S10 OD010417Postdoctoral Fellowship Award 18POST34030106Steven M. Gootter Foundation
6 · The paper itself

Abstract

aimsStem cell therapy has shown promise for treating myocardial infarction via re-muscularization and paracrine signalling in both small and large animals. Non-human primates (NHPs), such as rhesus macaques (Macaca mulatta), are primarily utilized in preclinical trials due to their similarity to humans, both genetically and physiologically. Currently, induced pluripotent stem cell-derived cardiomyocytes (iPSC-CMs) are delivered into the infarcted myocardium by either direct cell injection or an engineered tissue patch. Although both approaches have advantages in terms of sample preparation, cell-host interaction, and engraftment, how the iPSC-CMs respond to ischaemic conditions in the infarcted heart under these two different delivery approaches remains unclear. Here, we aim to gain a better understanding of the effects of hypoxia on iPSC-CMs at the transcriptome level. METHODS AND

resultsNHP iPSC-CMs in both monolayer culture (2D) and engineered heart tissue (EHT) (3D) format were exposed to hypoxic conditions to serve as surrogates of direct cell injection and tissue implantation in vivo, respectively. Outcomes were compared at the transcriptome level. We found the 3D EHT model was more sensitive to ischaemic conditions and similar to the native in vivo myocardium in terms of cell-extracellular matrix/cell-cell interactions, energy metabolism, and paracrine signalling.

conclusionBy exposing NHP iPSC-CMs to different culture conditions, transcriptome profiling improves our understanding of the mechanism of ischaemic injury.

Indexed as

Cell DifferentiationGene Expression ProfilingTissue EngineeringTranscriptomeAnimalsCell HypoxiaCell-Matrix JunctionsCells, CulturedEnergy MetabolismGene Regulatory NetworksHeart RateInduced Pluripotent Stem CellsMacaca mulattaMaleMiceMice, SCIDCardiomyocytesEngineered heart tissueHypoxiaInduced pluripotent stem cellsNon-human primateTranscriptome

Identifiers

PMID33002105
PMCPMC8318103
OpenAlexW3089835652

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.