Evidence map›Paper›PMID 33001465›Full record

ArticleThe EMBO journal2020

Nucleo-plastidic PAP8/pTAC6 couples chloroplast formation with photomorphogenesis.

Monique Liebers, François-Xavier Gillet, Abir Israel, Kevin Pounot, Louise Chambon, Maha Chieb, Fabien Chevalier, Rémi Ruedas, Adrien Favier, Pierre Gans and 4 more

Open access · bronzeAbstract read
In one paragraph

Article in The EMBO journal, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 22 papers.

0numbers the graph read from it
0cells of the map it votes in
22citing papers in PubMed
4.4field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

22 citing papers in PubMed, 38 citations in OpenAlex.

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  9. Regulation of chloroplast biogenesis, development, and signaling by endogenous and exogenous cues.Physiology and molecular biology of plants : an international journal of functional plant biology · 2024
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors at 2 institutions in 2 countries.

Monique Liebers *CNRS, CEA, INRA, IRIG-LPCV, Univ. Grenoble-Alpes, Grenoble, France.ORCID 0000-0001-8363-2449
François-Xavier Gillet *CNRS, CEA, INRA, IRIG-LPCV, Univ. Grenoble-Alpes, Grenoble, France.
Abir IsraelCNRS, CEA, INRA, IRIG-LPCV, Univ. Grenoble-Alpes, Grenoble, France.ORCID 0000-0002-2662-5821
Kevin PounotCNRS, CEA, INRA, IRIG-LPCV, Univ. Grenoble-Alpes, Grenoble, France.
Louise ChambonCNRS, CEA, INRA, IRIG-LPCV, Univ. Grenoble-Alpes, Grenoble, France.
Maha ChiebCNRS, CEA, INRA, IRIG-LPCV, Univ. Grenoble-Alpes, Grenoble, France.ORCID 0000-0002-3171-7253
Fabien ChevalierCNRS, CEA, INRA, IRIG-LPCV, Univ. Grenoble-Alpes, Grenoble, France.
Rémi RuedasCEA, CNRS, IBS, Univ. Grenoble Alpes, Grenoble, France.
Adrien FavierCEA, CNRS, IBS, Univ. Grenoble Alpes, Grenoble, France.
Pierre GansCEA, CNRS, IBS, Univ. Grenoble Alpes, Grenoble, France.
Elisabetta Boeri ErbaCEA, CNRS, IBS, Univ. Grenoble Alpes, Grenoble, France.
David CobessiCEA, CNRS, IBS, Univ. Grenoble Alpes, Grenoble, France.ORCID 0000-0002-5103-7976
Thomas PfannschmidtCNRS, CEA, INRA, IRIG-LPCV, Univ. Grenoble-Alpes, Grenoble, France.ORCID 0000-0002-7532-3467
Robert BlanvillainCNRS, CEA, INRA, IRIG-LPCV, Univ. Grenoble-Alpes, Grenoble, France.ORCID 0000-0002-6320-7207
Centre National de la Recherche Scientifique · FRLeibniz University Hannover · DE

Funding

Agence Nationale de la Recherche (ANR) ANR-10-INSB-05-02Agence Nationale de la Recherche (ANR) ANR-17-EURE-0003Agence Nationale de la Recherche (ANR) ANR-PEPRegulChloro3DAGIRDeutsche Forschungsgemeinschaft (DFG) PF323-5Université Grenoble Alpes (UGA)
6 · The paper itself

Abstract

The initial greening of angiosperms involves light activation of photoreceptors that trigger photomorphogenesis, followed by the development of chloroplasts. In these semi-autonomous organelles, construction of the photosynthetic apparatus depends on the coordination of nuclear and plastid gene expression. Here, we show that the expression of PAP8, an essential subunit of the plastid-encoded RNA polymerase (PEP) in Arabidopsis thaliana, is under the control of a regulatory element recognized by the photomorphogenic factor HY5. PAP8 protein is localized and active in both plastids and the nucleus, and particularly required for the formation of late photobodies. In the pap8 albino mutant, phytochrome-mediated signalling is altered, degradation of the chloroplast development repressors PIF1/PIF3 is disrupted, HY5 is not stabilized, and the expression of the photomorphogenesis regulator GLK1 is impaired. PAP8 translocates into plastids via its targeting pre-sequence, interacts with the PEP and eventually reaches the nucleus, where it can interact with another PEP subunit pTAC12/HMR/PAP5. Since PAP8 is required for the phytochrome B-mediated signalling cascade and the reshaping of the PEP activity, it may coordinate nuclear gene expression with PEP-driven chloroplastic gene expression during chloroplast biogenesis.

Indexed as

Acid PhosphataseArabidopsisArabidopsis ProteinsCell NucleusChloroplastsDNA-Directed RNA PolymerasesGene Expression Regulation, PlantLightMorphogenesisOrganelle BiogenesisPhytochromePlants, Genetically ModifiedPlastidsSignal TransductionTranscription FactorsTranscription, GeneticAcid PhosphataseArabidopsis ProteinsDNA-Directed RNA PolymerasesGLK1 protein, ArabidopsisHMR protein, ArabidopsisPhytochromepurple acid phosphataseTranscription FactorsArabidopsis PEP/PAPsbiogenesischloroplastphotobodiesphotomorphogenesis

Identifiers

PMID33001465
PMCPMC7667882
OpenAlexW3089519266

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.