Evidence map›Paper›PMID 33001260›Full record

ArticleTAG. Theoretical and applied genetics. Theoretische und angewandte Genetik2021

Fine mapping and candidate gene analysis of qRN5a, a novel QTL promoting root number in rice under low potassium.

Anowerul Islam, Yingxin Zhang, Galal Anis, Mohammad Hasanuzzaman Rani, Workie Anley, Qinqin Yang, Ling Liu, Xihong Shen, Liyong Cao, Shihua Cheng and 1 more

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In one paragraph

Article in TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
2.5field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 10 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 3 institutions in 5 countries.

Anowerul IslamChina National Center for Rice Improvement and State Key Laboratory of Rice Biology, China National Rice Research Institute, Hangzhou, 310006, China.
Yingxin ZhangChina National Center for Rice Improvement and State Key Laboratory of Rice Biology, China National Rice Research Institute, Hangzhou, 310006, China.
Galal AnisChina National Center for Rice Improvement and State Key Laboratory of Rice Biology, China National Rice Research Institute, Hangzhou, 310006, China.
Mohammad Hasanuzzaman RaniChina National Center for Rice Improvement and State Key Laboratory of Rice Biology, China National Rice Research Institute, Hangzhou, 310006, China.
Workie AnleyChina National Center for Rice Improvement and State Key Laboratory of Rice Biology, China National Rice Research Institute, Hangzhou, 310006, China.
Qinqin YangChina National Center for Rice Improvement and State Key Laboratory of Rice Biology, China National Rice Research Institute, Hangzhou, 310006, China.
Ling LiuChina National Center for Rice Improvement and State Key Laboratory of Rice Biology, China National Rice Research Institute, Hangzhou, 310006, China.
Xihong ShenChina National Center for Rice Improvement and State Key Laboratory of Rice Biology, China National Rice Research Institute, Hangzhou, 310006, China.
Liyong CaoChina National Center for Rice Improvement and State Key Laboratory of Rice Biology, China National Rice Research Institute, Hangzhou, 310006, China.
Shihua ChengChina National Center for Rice Improvement and State Key Laboratory of Rice Biology, China National Rice Research Institute, Hangzhou, 310006, China. chengshihua@caas.cn.
Weixun WuChina National Center for Rice Improvement and State Key Laboratory of Rice Biology, China National Rice Research Institute, Hangzhou, 310006, China. wuweixun@caas.cn.ORCID http://orcid.org/0000-0002-6816-8112
China National Rice Research Institute · CNBangladesh Agricultural University · BDField Crops Research Institute · VN

Funding

Agricultural Science and Technology Innovation program of Chinese Academy of Agricultural Sciences CAAS-ASTIP-2013-CNRRINational Key Transform Program 2016ZX08001-002National Natural Science Foundation of China 31871604Natural Science Foundation of Zhejiang Province LQ14C130003
6 · The paper itself

Abstract

key messageqRN5a, a novel QTL for increasing root number under low K in rice, was fine mapped to a 48.8-kb region on chromosome 5, and LOC_Os05g27980 is the most likely candidate gene. Potassium (K) is a mineral nutrient essential for plant growth and development, but the molecular mechanism for low-K (LK) tolerance in rice remains poorly understood. In our previous study, the quantitative trait locus (QTL) qRN5a for root number (RN) under LK was identified in the chromosome segment substitution line CSSL35 carrying segments from XieqingzaoB in the genetic background of Zhonghui9308 (ZH9308). CSSL35 developed more roots than ZH9308 under LK at the seedling stage, and qRN5a was initially located within a 1,023-kb genomic region. In this study, to understand the molecular basis of qRN5a, a large F

Indexed as

PotassiumQuantitative Trait LociGenes, PlantGenetic Association StudiesGenetic LinkageGenetic MarkersINDEL MutationOryzaPlant RootsPolymorphism, Single NucleotideGenetic MarkersPotassium

Identifiers

PMID33001260
OpenAlexW3090919298

What OpenQuestion holds

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.