Evidence map›Paper›PMID 32999368›Full record

ArticleScientific reports2020

Genomic analysis reveals high virulence and antibiotic resistance amongst phage susceptible Acinetobacter baumannii.

Udomluk Leungtongkam, Rapee Thummeepak, Thawatchai Kitti, Kannipa Tasanapak, Jintana Wongwigkarn, Kathryn M Styles, Elizabeth M H Wellington, Andrew D Millard, Antonia P Sagona, Sutthirat Sitthisak

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
2.7field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 26 citations in OpenAlex.

  1. Advances in phage therapy forFrontiers in microbiology · 2026
    Review
  2. Review
  3. Review
  4. Review
  5. Article
  6. CRISPR-Based Gene Editing inPharmaceuticals (Basel, Switzerland) · 2023
    Review
  7. Article
  8. Genomic analysis ofHeliyon · 2023
    Article
  9. Article
  10. Review
  11. Article
  12. Frontiers in microbiology · 2022
    Article
  13. Article
  14. Review
  15. Antibiotics (Basel, Switzerland) · 2021
    Article
  16. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 4 institutions in 2 countries.

Udomluk LeungtongkamDepartment of Microbiology and Parasitology, Faculty of Medical Science, Naresuan University, Phitsanulok, 65000, Thailand.
Rapee ThummeepakDepartment of Microbiology and Parasitology, Faculty of Medical Science, Naresuan University, Phitsanulok, 65000, Thailand.
Thawatchai KittiFaculty of Oriental Medicine, Chiang Rai College, Chiang Rai, 57000, Thailand.
Kannipa TasanapakDepartment of Microbiology and Parasitology, Faculty of Medical Science, Naresuan University, Phitsanulok, 65000, Thailand.
Jintana WongwigkarnDepartment of Microbiology and Parasitology, Faculty of Medical Science, Naresuan University, Phitsanulok, 65000, Thailand.
Kathryn M StylesSchool of Life Sciences, University of Warwick, Coventry, CV4 7AL, UK.
Elizabeth M H WellingtonSchool of Life Sciences, University of Warwick, Coventry, CV4 7AL, UK.
Andrew D MillardDepartment of Genetics and Genome Biology, University of Leicester, Leicester, LE1 7RH, UK.
Antonia P SagonaSchool of Life Sciences, University of Warwick, Coventry, CV4 7AL, UK.
Sutthirat SitthisakDepartment of Microbiology and Parasitology, Faculty of Medical Science, Naresuan University, Phitsanulok, 65000, Thailand. sutthirats@nu.ac.th.
Naresuan University · THUniversity of Warwick · GBChiangrai College · THUniversity of Leicester · GB

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

In this study, we examined the association between antimicrobial resistance, CRISPR/Cas systems and virulence with phage susceptibility in Acinetobacter baumannii and investigated draft genomes of phage susceptible multidrug resistant A. baumannii strains from Thailand. We investigated 230 A. baumannii strains using 17 lytic A. baumannii phages and the phage susceptibility was 46.5% (107/230). Phage susceptibility was also associated with resistance to numerous antibiotics (p-value < 0.05). We also found association between biofilm formation and the presence of ompA gene among phage susceptible A. baumannii strains (p-value < 0.05). A. baumannii isolates carrying cas5 or combinations of two or three other cas genes, showed a significant increase in phage resistance. Whole-genome sequences of seven phage susceptible A. baumannii isolates revealed that six groups of antibiotic resistance genes were carried by all seven phage susceptible A. baumannii. All strains carried biofilm associated genes and two strains harbored complete prophages, acquired copper tolerance genes, and CRISPR-associated (cas) genes. In conclusion, our data exhibits an association between virulence determinants and biofilm formation among phage susceptible A. baumannii strains. These data help to understand the bacterial co-evolution with phages.

Indexed as

Genome, BacterialAcinetobacter baumanniiAcinetobacter InfectionsAnti-Bacterial AgentsBacteriophagesBiofilmsDrug Resistance, BacterialVirulenceAnti-Bacterial Agents

Identifiers

PMID32999368
PMCPMC7528101
OpenAlexW3090375870

What OpenQuestion holds

Textmetadata
LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.