Evidence map›Paper›PMID 32999033›Full record

ArticleJournal of virology2020

Chikungunya Virus Strains from Each Genetic Clade Bind Sulfated Glycosaminoglycans as Attachment Factors.

Nicole McAllister, Yan Liu, Lisete M Silva, Anthony J Lentscher, Wengang Chai, Nian Wu, Kira A Griswold, Krishnan Raghunathan, Lo Vang, Jeff Alexander and 5 more

Erratum issuedOpen access · hybridAbstract read
In one paragraph

Article in Journal of virology, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 27 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
27citing papers in PubMed, 1 pooled it
4.5field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

27 citing papers in PubMed, 1 synthesis or guideline pooled it, 43 citations in OpenAlex.

  1. Pooled it
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  17. Chikungunya fever.Nature reviews. Disease primers · 2023
    Review
  18. Characterization of a glycan-binding complex of minor pilins completes the analysis ofProceedings of the National Academy of Sciences of the United States of America · 2023
    Article
  19. Article
  20. Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

15 authors at 5 institutions in 4 countries.

Nicole McAllisterDepartment of Microbiology and Molecular Genetics, University of Pittsburgh School of Medicine, Pittsburgh, Pennsylvania, USA.
Yan LiuGlycosciences Laboratory, Department of Metabolism, Digestion and Reproduction, Imperial College London, London, United Kingdom.
Lisete M SilvaGlycosciences Laboratory, Department of Metabolism, Digestion and Reproduction, Imperial College London, London, United Kingdom.
Anthony J LentscherDepartment of Microbiology and Molecular Genetics, University of Pittsburgh School of Medicine, Pittsburgh, Pennsylvania, USA.
Wengang ChaiGlycosciences Laboratory, Department of Metabolism, Digestion and Reproduction, Imperial College London, London, United Kingdom.
Nian WuGlycosciences Laboratory, Department of Metabolism, Digestion and Reproduction, Imperial College London, London, United Kingdom.
Kira A GriswoldDepartment of Microbiology and Molecular Genetics, University of Pittsburgh School of Medicine, Pittsburgh, Pennsylvania, USA.
Krishnan RaghunathanCenter for Microbial Pathogenesis, UPMC Children's Hospital of Pittsburgh, Pittsburgh, Pennsylvania, USA.
Lo VangEmergent Travel Health, Emergent BioSolutions Inc., San Diego, California, USA.
Jeff AlexanderEmergent Travel Health, Emergent BioSolutions Inc., San Diego, California, USA.
Kelly L WarfieldEmergent Travel Health, Emergent BioSolutions Inc., San Diego, California, USA.
Michael S DiamondDepartment of Pathology and Immunology, Washington University School of Medicine, St. Louis, Missouri, USA.
Ten FeiziGlycosciences Laboratory, Department of Metabolism, Digestion and Reproduction, Imperial College London, London, United Kingdom.
Laurie A SilvaCenter for Microbial Pathogenesis, UPMC Children's Hospital of Pittsburgh, Pittsburgh, Pennsylvania, USA laurie.silva@pitt.edu terence.dermody@chp.edu.ORCID 0000-0002-0316-3046
Terence S DermodyDepartment of Microbiology and Molecular Genetics, University of Pittsburgh School of Medicine, Pittsburgh, Pennsylvania, USA laurie.silva@pitt.edu terence.dermody@chp.edu.ORCID 0000-0003-1853-8741
University of Pittsburgh · USEmergent BioSolutions (United States) · USImperial College London · GBJinan University · CNWashington University in St. Louis · US

Funding

Viral Persistence and PathogenesisT32AI049820 · NIAID · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI DELUCA, NEAL A. · 2001 to 2024
$5.5M
Immunology of Infectious DiseaseT32AI060525 · NIAID · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI JoAnne L. Flynn · 2005 to 2026
$5.3M
Chikungunya Virus Replication and PathogenesisR01AI123348 · NIAID · VANDERBILT UNIVERSITY MEDICAL CENTER · PI DERMODY, TERENCE S., DIAMOND, MICHAEL S · 2016 to 2020
$3.7M
Engagement of Glycosaminoglycans during Chikungunya Virus InfectionF31AI147440 · NIAID · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI MCALLISTER, NICOLE · 2019 to 2020
$85k
Medical Research Council MC_U117533887NIAID NIH HHS F31 AI147440NIAID NIH HHS R01 AI123348NIAID NIH HHS T32 AI049820NIAID NIH HHS T32 AI060525Wellcome TrustWellcome Trust 108430/Z/15/ZWellcome Trust 218304/Z/19/ZWellcome Trust WT099197/Z/12/Z
6 · The paper itself

Abstract

Chikungunya virus (CHIKV) is an arthritogenic alphavirus that causes debilitating musculoskeletal disease. CHIKV displays broad cell, tissue, and species tropism, which may correlate with the attachment factors and entry receptors used by the virus. Cell surface glycosaminoglycans (GAGs) have been identified as CHIKV attachment factors. However, the specific types of GAGs and potentially other glycans to which CHIKV binds and whether there are strain-specific differences in GAG binding are not fully understood. To identify the types of glycans bound by CHIKV, we conducted glycan microarray analyses and discovered that CHIKV preferentially binds GAGs. Microarray results also indicate that sulfate groups on GAGs are essential for CHIKV binding and that CHIKV binds most strongly to longer GAG chains of heparin and heparan sulfate. To determine whether GAG binding capacity varies among CHIKV strains, a representative strain from each genetic clade was tested. While all strains directly bound to heparin and chondroitin sulfate in enzyme-linked immunosorbent assays (ELISAs) and depended on heparan sulfate for efficient cell binding and infection, we observed some variation by strain. Enzymatic removal of cell surface GAGs and genetic ablation that diminishes GAG expression reduced CHIKV binding and infectivity of all strains. Collectively, these data demonstrate that GAGs are the preferred glycan bound by CHIKV, enhance our understanding of the specific GAG moieties required for CHIKV binding, define strain differences in GAG engagement, and provide further evidence for a critical function of GAGs in CHIKV cell attachment and infection.

Indexed as

Virus AttachmentAnimalsArthritisCell LineChikungunya FeverChikungunya virusGlucuronosyltransferaseGlycosaminoglycansHeparan SulfateHeparinHumansPolysaccharidesViral TropismA73025B3GAT3 protein, humanGlucuronosyltransferaseGlycosaminoglycansHeparan SulfateHeparinPolysaccharidesalphavirusattachment factorschikungunya virusglycan microarraysglycansglycosaminoglycansheparan sulfate

Identifiers

PMID32999033
PMCPMC7925169
OpenAlexW3091378340

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.