Evidence map›Paper›PMID 32997711›Full record

ArticlePLoS pathogens2020

Defining the proteolytic landscape during enterovirus infection.

Mohsan Saeed, Sebastian Kapell, Nicholas T Hertz, Xianfang Wu, Kierstin Bell, Alison W Ashbrook, Milica Tesic Mark, Henry A Zebroski, Maxwell L Neal, Malin Flodström-Tullberg and 4 more

Open access · goldAbstract read
In one paragraph

Article in PLoS pathogens, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 33 papers.

0numbers the graph read from it
0cells of the map it votes in
33citing papers in PubMed
3.1field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

33 citing papers in PubMed, 46 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Review
  9. Article
  10. Article
  11. Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors at 4 institutions in 2 countries.

Mohsan SaeedLaboratory of Virology and Infectious Disease, The Rockefeller University, New York, NY, United States of America.ORCID 0000-0001-8505-7054
Sebastian KapellLaboratory of Virology and Infectious Disease, The Rockefeller University, New York, NY, United States of America.ORCID 0000-0001-9304-558X
Nicholas T HertzLaboratory of Brain Development and Repair, The Rockefeller University, New York, NY, United States of America.ORCID 0000-0002-6527-6898
Xianfang WuLaboratory of Virology and Infectious Disease, The Rockefeller University, New York, NY, United States of America.
Kierstin BellLaboratory of Virology and Infectious Disease, The Rockefeller University, New York, NY, United States of America.
Alison W AshbrookLaboratory of Virology and Infectious Disease, The Rockefeller University, New York, NY, United States of America.ORCID 0000-0003-1114-1426
Milica Tesic MarkProteomics Resource Center, The Rockefeller University, New York, NY, United States of America.
Henry A ZebroskiProteomics Resource Center, The Rockefeller University, New York, NY, United States of America.ORCID 0000-0003-3012-2335
Maxwell L NealCenter for Global Infectious Disease Research, Seattle Children's Research Institute, Seattle, WA, United States of America.ORCID 0000-0002-2390-6572
Malin Flodström-TullbergThe Center for Infectious Medicine, Department of Medicine HS, Karolinska Institute, Karolinska University Hospital, Stockholm, Sweden.ORCID 0000-0003-2685-2052
Margaret R MacDonaldLaboratory of Virology and Infectious Disease, The Rockefeller University, New York, NY, United States of America.ORCID 0000-0001-5177-2068
John D AitchisonCenter for Global Infectious Disease Research, Seattle Children's Research Institute, Seattle, WA, United States of America.
Henrik MolinaProteomics Resource Center, The Rockefeller University, New York, NY, United States of America.
Charles M RiceLaboratory of Virology and Infectious Disease, The Rockefeller University, New York, NY, United States of America.ORCID 0000-0003-3087-8079
Rockefeller University · USBoston University · USInfectious Disease Research Institute · USKarolinska University Hospital · SE

Funding

TR&D Project 4. The Imaging Stage: Multiscale Spatiotemporal Modeling of Macromolecular Systems in Cellular NeighborhoodsP41GM109824 · NIGMS · ROCKEFELLER UNIVERSITY · PI ROUT, MICHAEL P · 2014 to 2023
$18.8M
Structure-Function Mapping of the Nuclear Pore Complex-RenewalR01GM112108 · NIGMS · ROCKEFELLER UNIVERSITY · PI JOHN D. AITCHISON, MICHAEL P ROUT · 2015 to 2026
$9.1M
Type I interferon-stimulated genes and the antiviral immune responseR01AI091707 · NIAID · ROCKEFELLER UNIVERSITY · PI RICE, CHARLES M · 2011 to 2020
$5.5M
NIAID NIH HHS R01 AI091707NIGMS NIH HHS P41 GM109824NIGMS NIH HHS R01 GM112108
6 · The paper itself

Abstract

Viruses cleave cellular proteins to remodel the host proteome. The study of these cleavages has revealed mechanisms of immune evasion, resource exploitation, and pathogenesis. However, the full extent of virus-induced proteolysis in infected cells is unknown, mainly because until recently the technology for a global view of proteolysis within cells was lacking. Here, we report the first comprehensive catalog of proteins cleaved upon enterovirus infection and identify the sites within proteins where the cleavages occur. We employed multiple strategies to confirm protein cleavages and assigned them to one of the two enteroviral proteases. Detailed characterization of one substrate, LSM14A, a p body protein with a role in antiviral immunity, showed that cleavage of this protein disrupts its antiviral function. This study yields a new depth of information about the host interface with a group of viruses that are both important biological tools and significant agents of disease.

Indexed as

Cysteine EndopeptidasesEnterovirusEnterovirus InfectionsHost-Pathogen InteractionsHumansProteolysisViral ProteinsVirus ReplicationCysteine EndopeptidasesViral Proteins

Identifiers

PMID32997711
PMCPMC7549765
OpenAlexW3089565700

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.